ggKbase home page

SCN18_25_1_16_R1_B_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_90_1
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)
SCN18_25_1_16_R1_B_scaffold_90_2
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(475..1140)
DNA (666bp) protein (222aa)
Putative O-methyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKJ4_9SPHI
macrocin-O-methyltransferase TylF
Macrocin-O-methyltransferase TylF {ECO:0000313|EMBL:AHF16894.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_1_16_R1_B_scaffold_90_3
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1576..1851)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSD3_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU62697.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_25_1_16_R1_B_scaffold_90_4
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2191..3540)
DNA (1350bp) protein (450aa)
Amidohydrolase 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI8_NIAKG
amidohydrolase
Amidohydrolase 3 {ECO:0000313|EMBL:AEV96557.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_1_16_R1_B_scaffold_90_5
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3554..6667)
DNA (3114bp) protein (1038aa)
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI7_NIAKG
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AEV96556.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_1_16_R1_B_scaffold_90_6
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6742..7416
DNA (675bp) protein (225aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Deoxyribose-phosphate aldolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPJ3_9SPHI
SCN18_25_1_16_R1_B_scaffold_90_7
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7454..7924
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000369A16A
Sporulation protein {ECO:0000313|EMBL:KIC90705.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
sporulation protein
SCN18_25_1_16_R1_B_scaffold_90_8
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8123..8311
DNA (189bp) protein (63aa)
SCN18_25_1_16_R1_B_scaffold_90_9
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8521..9699
DNA (1179bp) protein (393aa)
Amidohydrolase {ECO:0000313|EMBL:AEV96551.1}; EC=3.5.1.47 {ECO:0000313|EMBL:AEV96551.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI2_NIAKG
amidohydrolase
SCN18_25_1_16_R1_B_scaffold_90_10
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9771..12110
DNA (2340bp) protein (780aa)
Malic enzyme {ECO:0000313|EMBL:KIC90711.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KIC90711.1};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
malic enzyme n=1 Tax=Segetibacter koreensis RepID=UPI0003666B1D
allosteric NADP-dependent malic enzyme
SCN18_25_1_16_R1_B_scaffold_90_11
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12126..12863
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKA7_NIAKG
ABC transporter permease {ECO:0000313|EMBL:KIC90712.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_90_12
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12889..13740
DNA (852bp) protein (284aa)
Phosphonate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKA6_NIAKG
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO44813.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
phosphonate-transporting ATPase
SCN18_25_1_16_R1_B_scaffold_90_13
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13848..15029)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03274.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_1_16_R1_B_scaffold_90_14
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15030..15665)
DNA (636bp) protein (212aa)
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRU0_NIAKG
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEW03275.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_1_16_R1_B_scaffold_90_15
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15685..17364)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRU1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03276.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_1_16_R1_B_scaffold_90_16
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(17393..18775)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EB245
histidyl-tRNA synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_25_1_16_R1_B_scaffold_90_17
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18929..19207
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037ADB73
SCN18_25_1_16_R1_B_scaffold_90_18
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19210..20139
DNA (930bp) protein (310aa)
Phosphate ABC transporter substrate-binding protein, PhoT family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRU5_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90549.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
phosphate ABC transporter substrate-binding protein
SCN18_25_1_16_R1_B_scaffold_90_19
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20176..21840
DNA (1665bp) protein (555aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRU6_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO41495.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_90_20
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21986..22915
DNA (930bp) protein (310aa)
antitermination factor NusB n=1 Tax=Niabella aurantiaca RepID=UPI00035CF3C1
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
NusB antitermination factor
SCN18_25_1_16_R1_B_scaffold_90_21
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22926..23360
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWF2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93259.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_90_22
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23390..23731
DNA (342bp) protein (114aa)
Preprotein translocase, YajC subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGG1_NIAKG
preprotein translocase subunit YajC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_25_1_16_R1_B_scaffold_90_23
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23735..24367
DNA (633bp) protein (211aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Dephospho-CoA kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGG0_NIAKG
dephospho-CoA kinase
SCN18_25_1_16_R1_B_scaffold_90_24
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24446..24646
DNA (201bp) protein (67aa)
SCN18_25_1_16_R1_B_scaffold_90_25
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25065..26072)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036947A5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF14659.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_1_16_R1_B_scaffold_90_26
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26183..27898)
DNA (1716bp) protein (572aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF90_NIAKG
amino acid/polyamine/organocation transporter
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:AEV97300.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_1_16_R1_B_scaffold_90_27
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28028..29128)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036ED50F
lipid-A-disaccharide synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_25_1_16_R1_B_scaffold_90_28
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29265..30020
DNA (756bp) protein (252aa)
XRE family transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI000373341B
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC95587.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
XRE family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_90_29
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30096..30518
DNA (423bp) protein (141aa)
Single-stranded DNA-binding protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJZ2_9SPHI
single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|RuleBase:RU000524}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_1_16_R1_B_scaffold_90_30
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30702..31334
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366615C
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AEW03522.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 181 in total

View Taxonomy