ggKbase home page

SCN18_25_1_16_R2_B_scaffold_2702

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_2702_1
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..341)
DNA (339bp) protein (113aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
delta-aminolevulinic acid dehydratase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349ED50
hemB; delta-aminolevulinic acid dehydratase
SCN18_25_1_16_R2_B_scaffold_2702_2
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(338..1150)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D1197
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KJL36536.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
uroporphyrinogen-III synthase
SCN18_25_1_16_R2_B_scaffold_2702_3
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1147..2142)
DNA (996bp) protein (332aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
porphobilinogen deaminase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003495189
porphobilinogen deaminase
SCN18_25_1_16_R2_B_scaffold_2702_4
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2139..2816)
DNA (678bp) protein (226aa)
chlorite dismutase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A8576
Chlorite dismutase {ECO:0000313|EMBL:KHK99802.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_2702_5
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2873..3151)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373777F
Uncharacterized protein {ECO:0000313|EMBL:EZP29237.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_2702_6
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3141..3551)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000347B474
Uncharacterized protein {ECO:0000313|EMBL:KEP74253.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_2702_7
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3553..3933)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037AD7FA
Uncharacterized protein {ECO:0000313|EMBL:CDK01375.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_2702_8
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4020..5594)
DNA (1575bp) protein (525aa)
protoporphyrinogen oxidase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D9ED4
Protoporphyrinogen oxidase {ECO:0000313|EMBL:KHK99798.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
protoporphyrinogen oxidase
SCN18_25_1_16_R2_B_scaffold_2702_9
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5591..6514)
DNA (924bp) protein (308aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
uroporphyrinogen decarboxylase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BF1C2
hemE; uroporphyrinogen-III decarboxylase
Displaying 9 items

View Taxonomy