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SCN18_25_1_16_R2_B_scaffold_628

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_628_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1..231)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E897_9MICO
Bacteriocin biosynthesis cyclodehydratase domain protein {ECO:0000313|EMBL:EZP27053.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCN18_25_1_16_R2_B_scaffold_628_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(326..1708)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D61C8
Uncharacterized protein {ECO:0000313|EMBL:KEP75835.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_628_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

1833..2957
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000365B4E9
ATP-dependent serine peptidase containing a PDZ domain protein {ECO:0000313|EMBL:KHK97380.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
secreted protein containing a PDZ domain
SCN18_25_1_16_R2_B_scaffold_628_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3032..5932
DNA (2901bp) protein (967aa)
membrane protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B1991
UPF0182 protein LK09_11380 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_628_trna_1
unknown

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5986..6059
DNA (74bp)
transferRNA Met
SCN18_25_1_16_R2_B_scaffold_628_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

6179..6697
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D8762D
Multisubunit Na+/H+ antiporter MrpB subunit {ECO:0000313|EMBL:GAD33199.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
multisubunit Na+/H+ antiporter, MnhB subunit
SCN18_25_1_16_R2_B_scaffold_628_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

6694..7500
DNA (807bp) protein (269aa)
hydrolase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003720B2E
Predicted amidohydrolase {ECO:0000313|EMBL:CDK01254.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
amidohydrolase
SCN18_25_1_16_R2_B_scaffold_628_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7517..8716)
DNA (1200bp) protein (400aa)
aminotransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000366822C
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:GAD33197.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
aspartate/tyrosine/aromatic aminotransferase
SCN18_25_1_16_R2_B_scaffold_628_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

8817..10463
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003706DB8
Serine protease {ECO:0000313|EMBL:KHK97383.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain
SCN18_25_1_16_R2_B_scaffold_628_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

10504..11787
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D9191C
Glycosyl/glycerophosphate transferase {ECO:0000313|EMBL:KHK97554.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
glycosyl/glycerophosphate transferase
SCN18_25_1_16_R2_B_scaffold_628_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11784..13235
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003721AAC
glycosyl/glycerophosphate transferase
Putative glycosyl/glycerophosphate transferase {ECO:0000313|EMBL:BAJ76111.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_1_16_R2_B_scaffold_628_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13248..14342)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F0051
Glycosyltransferase {ECO:0000313|EMBL:CDK01263.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
glycosyltransferase
SCN18_25_1_16_R2_B_scaffold_628_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14385..15659
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F63E1E
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88407.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
glycosyl/glycerophosphate transferase
SCN18_25_1_16_R2_B_scaffold_628_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15675..17060)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036DE4B3
Uncharacterized protein {ECO:0000313|EMBL:EPD84023.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_628_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17215..17532
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003675A0A
Uncharacterized protein {ECO:0000313|EMBL:KDA06061.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_628_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17534..17752)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003715F74
Bacteriophage tail assembly protein {ECO:0000313|EMBL:GAD33122.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCN18_25_1_16_R2_B_scaffold_628_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17788..18102)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030E1131
Uncharacterized protein {ECO:0000313|EMBL:KJL27466.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCN18_25_1_16_R2_B_scaffold_628_17
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18195..19145)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035EF17E
Uncharacterized protein {ECO:0000313|EMBL:CDK01266.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_628_18
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(19197..19889)
DNA (693bp) protein (231aa)
Bifunctional protein GlmU {ECO:0000313|EMBL:KJL27468.1}; EC=2.3.1.157 {ECO:0000313|EMBL:KJL27468.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036020CC
sugar nucleotidyltransferase
Displaying 19 items

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