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SCN18_25_1_16_R2_B_scaffold_681

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_681_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

64..654
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030A4DC6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW42132.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCN18_25_1_16_R2_B_scaffold_681_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

670..1287
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F5EFD5
Uncharacterized protein {ECO:0000313|EMBL:KHK96134.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_681_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1291..2715)
DNA (1425bp) protein (475aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Argininosuccinate lyase n=2 Tax=Microbacterium RepID=H8E2F7_9MICO
argH; argininosuccinate lyase
SCN18_25_1_16_R2_B_scaffold_681_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2712..3659)
DNA (948bp) protein (316aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ornithine carbamoyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036AAB29
argF; ornithine carbamoyltransferase
SCN18_25_1_16_R2_B_scaffold_681_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3656..4909)
DNA (1254bp) protein (418aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
acetylornithine aminotransferase n=1 Tax=Microbacterium yannicii RepID=UPI000319C2FA
argD; ornithine/acetylornithine aminotransferase
SCN18_25_1_16_R2_B_scaffold_681_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4921..5820)
DNA (900bp) protein (300aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Acetylglutamate kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9I9_MICTS
argB; acetylglutamate kinase
SCN18_25_1_16_R2_B_scaffold_681_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5817..6974)
DNA (1158bp) protein (386aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9J0_MICTS
argJ; N-acetylglutamate synthase
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_1_16_R2_B_scaffold_681_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6971..8020)
DNA (1050bp) protein (350aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037D4AF0
argC; acetylglutamate semialdehyde dehydrogenase
SCN18_25_1_16_R2_B_scaffold_681_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8291..9034)
DNA (744bp) protein (248aa)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:KJL36367.1}; EC=3.1.1.45 {ECO:0000313|EMBL:KJL36367.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
carboxymethylenebutenolidase (EC:3.1.1.45)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7A558
SCN18_25_1_16_R2_B_scaffold_681_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(9100..11631)
DNA (2532bp) protein (844aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364B2A0
pheT; phenylalanyl-tRNA synthetase beta subunit
SCN18_25_1_16_R2_B_scaffold_681_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(11631..12674)
DNA (1044bp) protein (348aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMW1_9MICO
pheS; phenylalanyl-tRNA synthetase alpha subunit
SCN18_25_1_16_R2_B_scaffold_681_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12714..13514)
DNA (801bp) protein (267aa)
RNA methyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D4604
RNA methyltransferase {ECO:0000313|EMBL:KHK96147.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rRNA methyltransferase
SCN18_25_1_16_R2_B_scaffold_681_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(13613..13999)
DNA (387bp) protein (129aa)
50S ribosomal protein L20 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9K0_MICTS
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
rplT; ribosomal protein L20
SCN18_25_1_16_R2_B_scaffold_681_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(14031..14225)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B31CF8
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
50S ribosomal protein L35
SCN18_25_1_16_R2_B_scaffold_681_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14295..14975)
DNA (681bp) protein (227aa)
Translation initiation factor IF-3 n=2 Tax=Microbacterium RepID=H8E2D6_9MICO
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
infC; translation initiation factor 3 (IF-3)
SCN18_25_1_16_R2_B_scaffold_681_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

15199..15591
DNA (393bp) protein (131aa)
ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377F999
Uncharacterized protein {ECO:0000313|EMBL:KJL36356.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ATPase
SCN18_25_1_16_R2_B_scaffold_681_17
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15613..16395)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362E2A0
Uncharacterized protein {ECO:0000313|EMBL:KHK96152.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_681_18
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(16379..17125)
DNA (747bp) protein (249aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000360EC26
priA; phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
SCN18_25_1_16_R2_B_scaffold_681_19
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17192..17842)
DNA (651bp) protein (217aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
glutamine amidotransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002EC2E3A
hisH; glutamine amidotransferase
SCN18_25_1_16_R2_B_scaffold_681_20
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17839..18450)
DNA (612bp) protein (204aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00263879};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
imidazoleglycerol-phosphate dehydratase n=1 Tax=Microbacterium yannicii RepID=UPI0002D58E9C
imidazoleglycerol-phosphate dehydratase
SCN18_25_1_16_R2_B_scaffold_681_21
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18447..18752)
DNA (306bp) protein (102aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Histidinol-phosphate aminotransferase n=2 Tax=Microbacterium RepID=H8E2D0_9MICO
hisC1; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Displaying 21 items

View Taxonomy