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SCN18_25_1_16_R2_B_scaffold_744

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_744_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1..123
DNA (123bp) protein (41aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B6BB49
Uncharacterized protein {ECO:0000313|EMBL:KJL35206.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCN18_25_1_16_R2_B_scaffold_744_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

369..707
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C7027
Uncharacterized protein {ECO:0000313|EMBL:EYT60865.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCN18_25_1_16_R2_B_scaffold_744_trna_2
unknown

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comp(748..820)
DNA (73bp)
transferRNA Ala
SCN18_25_1_16_R2_B_scaffold_744_trna_1
unknown

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comp(832..905)
DNA (74bp)
transferRNA Ile
SCN18_25_1_16_R2_B_scaffold_744_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(988..1392)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N930_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74466.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_1_16_R2_B_scaffold_744_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(1389..3962)
DNA (2574bp) protein (858aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
DNA gyrase subunit A n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9C0_9MICO
gyrA; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
SCN18_25_1_16_R2_B_scaffold_744_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4028..6085)
DNA (2058bp) protein (686aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
DNA gyrase subunit B n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N932_MICTS
gyrB; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
SCN18_25_1_16_R2_B_scaffold_744_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6210..6695)
DNA (486bp) protein (162aa)
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N933_MICTS
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives {ECO:0000313|EMBL:BAJ74469.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_1_16_R2_B_scaffold_744_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6688..7875)
DNA (1188bp) protein (396aa)
DNA repair protein RecF n=1 Tax=Microbacterium yannicii RepID=UPI0002DD7D77
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
recF; recombinational DNA repair ATPase
SCN18_25_1_16_R2_B_scaffold_744_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7934..9085)
DNA (1152bp) protein (384aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
DNA polymerase III subunit beta n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C23A1
dnaN; DNA polymerase sliding clamp subunit
SCN18_25_1_16_R2_B_scaffold_744_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(9585..10991)
DNA (1407bp) protein (469aa)
chromosomal replication initiation protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035EA027
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
dnaA; ATPase
SCN18_25_1_16_R2_B_scaffold_744_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


11290..11427
DNA (138bp) protein (46aa)
50S ribosomal protein L34 n=2 Tax=Microbacterium RepID=H8E9B4_9MICO
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rpmH; ribosomal protein L34
SCN18_25_1_16_R2_B_scaffold_744_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11458..11772
DNA (315bp) protein (105aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
Ribonuclease P protein component n=1 Tax=Microbacterium sp. TS-1 RepID=U2YVB5_9MICO
RNase P protein component
SCN18_25_1_16_R2_B_scaffold_744_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11769..12125
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000349B32C
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_1_16_R2_B_scaffold_744_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

12129..13211
DNA (1083bp) protein (361aa)
preprotein translocase subunit YidC n=1 Tax=Microbacterium sp. B19 RepID=UPI0003477092
Preprotein translocase subunit YidC {ECO:0000313|EMBL:KHK95188.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
preprotein translocase subunit YidC
SCN18_25_1_16_R2_B_scaffold_744_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13233..13748
DNA (516bp) protein (172aa)
DNA-binding protein n=1 Tax=Microbacterium yannicii RepID=UPI00030EAEA5
RNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:KEP74881.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCN18_25_1_16_R2_B_scaffold_744_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13768..14412
DNA (645bp) protein (215aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DEDA2
gidB; S-adenosylmethionine-dependent methyltransferase
SCN18_25_1_16_R2_B_scaffold_744_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14456..15253
DNA (798bp) protein (266aa)
SCN18_25_1_16_R2_B_scaffold_744_17
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

15463..16395
DNA (933bp) protein (311aa)
chromosome partitioning protein n=1 Tax=Microbacterium yannicii RepID=UPI00037BA7DD
Chromosome partitioning protein {ECO:0000313|EMBL:EPD85860.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
parA; ATPase
SCN18_25_1_16_R2_B_scaffold_744_18
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

16395..17378
DNA (984bp) protein (328aa)
ParB family chromosome partitioning protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABT9_9MICO
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KIC57960.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
parB; transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_744_19
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17395..17616)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F0F16
Sigma-70 region 2 domain-containing protein {ECO:0000313|EMBL:EFL10237.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
Displaying 21 items

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