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SCN18_25_1_16_R2_B_scaffold_958

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_958_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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2..1456
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030639D3
Uncharacterized protein {ECO:0000313|EMBL:KIC57546.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_958_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1526..2101
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F59DC5
Uncharacterized protein {ECO:0000313|EMBL:EXJ50641.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SAM-dependent methyltransferase
SCN18_25_1_16_R2_B_scaffold_958_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2071..4323)
DNA (2253bp) protein (751aa)
(p)ppGpp synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B261C
GTP pyrophosphokinase {ECO:0000313|EMBL:KHK97375.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
relA; guanosine polyphosphate pyrophosphohydrolase/synthetase
SCN18_25_1_16_R2_B_scaffold_958_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4395..5384)
DNA (990bp) protein (330aa)
Protein-export membrane protein SecF n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AMG4_9MICO
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
preprotein translocase subunit SecF
SCN18_25_1_16_R2_B_scaffold_958_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5384..7120)
DNA (1737bp) protein (579aa)
Protein translocase subunit SecD n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3C2_9MICO
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
preprotein translocase subunit SecD
SCN18_25_1_16_R2_B_scaffold_958_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7152..7652)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031CA844
Uncharacterized protein {ECO:0000313|EMBL:KHK97372.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
preprotein translocase subunit YajC
SCN18_25_1_16_R2_B_scaffold_958_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7733..8770)
DNA (1038bp) protein (346aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
Holliday junction DNA helicase RuvB n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037B4589
ruvB; holliday junction resolvasome, helicase subunit
SCN18_25_1_16_R2_B_scaffold_958_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8763..9383)
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036FAD9E
holliday junction resolvasome, DNA-binding subunit
SCN18_25_1_16_R2_B_scaffold_958_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9439..9942)
DNA (504bp) protein (168aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Microbacterium yannicii RepID=UPI000370A28C
holliday junction resolvasome, endonuclease subunit
SCN18_25_1_16_R2_B_scaffold_958_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10073..10831)
DNA (759bp) protein (253aa)
transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0003009907
Probable transcriptional regulatory protein RS85_01469 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_958_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10898..11431)
DNA (534bp) protein (178aa)
pyridoxamine 5-phosphate oxidase n=1 Tax=Agromyces subbeticus RepID=UPI0003B473EE
Pyridoxamine 5-phosphate oxidase {ECO:0000313|EMBL:EXJ50632.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_958_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11470..12063)
DNA (594bp) protein (198aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DAD68C
glutamine amidotransferase
SCN18_25_1_16_R2_B_scaffold_958_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12085..12981)
DNA (897bp) protein (299aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pyridoxal biosynthesis lyase n=1 Tax=Microbacterium yannicii RepID=UPI0002F09499
pyridoxine biosynthesis protein
SCN18_25_1_16_R2_B_scaffold_958_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13038..13964
DNA (927bp) protein (309aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pyridoxal kinase (EC:2.7.1.35)
Pyridoxamine kinase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9W0_9MICO
SCN18_25_1_16_R2_B_scaffold_958_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13995..14135)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B474_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83369.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Displaying 15 items

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