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SCN18_25_1_16_R2_B_scaffold_977

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_977_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1..516
DNA (516bp) protein (172aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003497EE7
exonuclease VII, large subunit
SCN18_25_1_16_R2_B_scaffold_977_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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513..752
DNA (240bp) protein (80aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000301FCA7
xseB; exonuclease VII small subunit
SCN18_25_1_16_R2_B_scaffold_977_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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749..1390
DNA (642bp) protein (214aa)
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Microbacterium sp. TS-1 RepID=U2XHR1_9MICO
Amino acid transporter {ECO:0000313|EMBL:KHK98460.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
amino acid transporters
SCN18_25_1_16_R2_B_scaffold_977_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1387..2040
DNA (654bp) protein (218aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031C75EF
cynT; carbonic anhydrase
SCN18_25_1_16_R2_B_scaffold_977_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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2085..3479
DNA (1395bp) protein (465aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Fumarate hydratase class II n=1 Tax=Microbacterium sp. TS-1 RepID=U2YPP7_9MICO
fumC; fumarase
SCN18_25_1_16_R2_B_scaffold_977_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3531..5057
DNA (1527bp) protein (509aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367A1A0
signal transduction histidine kinase
SCN18_25_1_16_R2_B_scaffold_977_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

5054..5710
DNA (657bp) protein (219aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000347E218
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:BAJ75975.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_1_16_R2_B_scaffold_977_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(5813..6454)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Solanum tuberosum RepID=M1BC09_SOLTU
Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400041800}; TaxID=4113 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.;" source="Solanum tuberosum (Potato).;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_977_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(6620..7936)
DNA (1317bp) protein (439aa)
phosphate starvation protein PhoH n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F9334
Putative ATP-binding protein {ECO:0000313|EMBL:GAD32765.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
phoH; ATPase
SCN18_25_1_16_R2_B_scaffold_977_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8166..9287)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036A7F49
Aminotransferase class V {ECO:0000313|EMBL:CDK00150.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_977_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9329..10009)
DNA (681bp) protein (227aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
UDP pyrophosphate synthase n=1 Tax=Microbacterium yannicii RepID=UPI0002F1DBEA
uppS; undecaprenyl pyrophosphate synthase
SCN18_25_1_16_R2_B_scaffold_977_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

10239..10943
DNA (705bp) protein (235aa)
DNA-binding protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003777B43
DNA-binding protein {ECO:0000313|EMBL:EZP26970.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
membrane protein, hemolysin III homolog
SCN18_25_1_16_R2_B_scaffold_977_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10952..11266)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F03FFE
Uncharacterized protein {ECO:0000313|EMBL:CDK00147.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
arabinose efflux permease
SCN18_25_1_16_R2_B_scaffold_977_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11333..11728
DNA (396bp) protein (132aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBB3_MICTS
Transcriptional regulator {ECO:0000313|EMBL:KHK98470.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_977_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11809..12300
DNA (492bp) protein (164aa)
transcription elongation factor GreA n=1 Tax=Microbacterium yannicii RepID=UPI0003052BD4
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
transcription elongation factor
SCN18_25_1_16_R2_B_scaffold_977_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12322..13548)
DNA (1227bp) protein (409aa)
Threonine dehydratase {ECO:0000313|EMBL:KIC60258.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KIC60258.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
threonine dehydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C57FF
threonine dehydratase
SCN18_25_1_16_R2_B_scaffold_977_17
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13545..13928)
DNA (384bp) protein (128aa)
AI-E2 family membrane protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003731D74
Permease {ECO:0000313|EMBL:KHK98473.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
permease
Displaying 17 items

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