ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCN18_25_1_16_R2_B_scaffold_1040_4

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 2615..6205

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036FE048 similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 1216.0
  • Bit_score: 1684
  • Evalue 0.0
DNA helicase {ECO:0000313|EMBL:KHK95635.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 1197.0
  • Bit_score: 1718
  • Evalue 0.0
superfamily I DNA and RNA helicase and helicase subunits similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 1215.0
  • Bit_score: 1617
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3591
ATGCGGTACATACCCGACGAGGGCCGGATCGTCTGGAGCGCGAGCGATCTGAAGGCTGCGGCCGAGTGCGAGTTCGCGTGGCTGCGCGCGATCGATGCGAAGCTCGGTCGCGTCGCGCCCGTCGACGACCCGGCCGACGCGACGCTCGAGCGCGCGGGGCGCCTGGGTACCGAGCACGAGCAGCGCGTGCTCGAGTCCTATCGCGACGTCTTCGGTCCGGCGGTCGCCGAGATCCCCGAGACGTCCTCGGCAGATGCGGGGGGGCTCGCCGCCGCGGTCGAGGCGACGCGCGTCGCGCTCGCCGACGCCGCGATGCGCGTCGTGTACCAGGCGGCGTTCGCGACCCCCGACTTCGTGGGCTTCGCCGACTTCCTCGTCCGCGACGACGCCGGGCGGTGGATCGTGCAGGACTCCAAGCTCGCCCGTCACGCACGGGTCACCGCACTCATGCAGCTCGCGGCATACGCCGACCAGCTCGACCGGCTGGGGGTGCCGCGGTCGTCCCGGGTCGAGCTGCTCCTCGGCGACGGGACCACGAGCACCCACGAGTCGGCCGACCTCATGCCGGTCTTCCGGCTGCGGCGCGAGCGGCTGCGGGCTCTGGTGGCCGACCGGCACGTCGAGGCCGGCGCCGAACACCCCGCGATCGCGTGGGGCGACCCGCGCGGCGAGCTCGGCGTCGTGGCGTGCGGGCGGTGCGCGACGTGCGACCTGGAGGTGGTGGCATCCCGCGACCTGCTCCTCGTGGCCGGGATGCGGCCGGTGCAGCGCGAGCGACTGCGGGCGGCCGGGATCGCCTCGATCGATGCGCTCGCCACGGCGACGGCCCCTCCCGCGCGCATGAGCGCCGACACCTTCGCGATGCTCCGCACCCAGGCGCGGCTGCAGCTCGCGAGCCCGGCCGGGGTCCCGGTCCCCGCCGTCGTCCCGGCGGCGCCCGTCCCCGTGGGAGCGCCGGTCACGGCCACGGCGCTCGCGGATGCCGCGACCGTCGCCGCTCCGGAGGCCGCCCCCGCGGTGCCCACGTACGAGGTCGTCTTCCCCACGGCGCTCGGTGCCCTCCCGCGGCCCGACCACGGCGACATCTTCTTCGATTTCGAGGGCGACCCGCTCTACACCGAGGGCCCCGCGCGGGAGTGGGGGATCGACTACCTGTTCGGCTGGGTCGACGACCGGGAGCAGTATTCGGCGCTGTGGGCCCACTCGTTCGCGGAGGAGCGCGTCGCGCTCGAGACCTTCCTCGACCTGGTGGCGCTGCGGCGGTCGCAGCATCCGGGCATGCACATCTACCACTACGCCCCGTACGAGCCGAACCACCTCCTCGCGATGGCGGCACGGCACGGCGTGCGCGAGAGCGATGTCGACCGCCTGCTGCGCGATGGGGTGTTCGTCGACCTCTATCCGATCGTGCGGCGCGCACTGCGGGTGGGGTCGCGGTCCTACTCCATCAAGAAGCTCGAGCCGCTCTACATGGGCGACGAGGTGCGCACGAGCGATGTGCAGAAGGGCGACGAGTCGATCGTCCGCTACGTCGAGGCGCGCGGGCTCGTCGCCGATGGGCGGGAGGCCGAGGCGCGCGACGTCTTCGCCGACCTGGCGGACTACAACCGCTACGACTGCGTCTCCACGCGGCGACTGCGCGACTGGCTCGTCGACCGAGCGCGCGAGGCGGGGCTGCGGCCGTCGGTCGACGTGGAGCCGGGCGAGGCGGGGTACGCGCCGTCGCCCCGTGCCGAGAGCCTCGAGCGGCTCGCCGCGGCGCGGGCGGCGGCCGCGGGCACGCCGGACGACGCCGACGCCGAGGCCCTTCGGCTGGGCGCCGCGGCGATCGACTACTACCCGCGGGAGGCGAAGACCTTCTGGGCGACGCACTTCCTCCGTCTGCGCGAGCCCGTCTCGGTGTGGGAGGACGCGAGGGACGTCGTGGTGGTCGACGCCGATCGGTCCGAGGTCGTCGAGGACTGGCATCCCGGTCCCCGCGCGGTGCGGCGAATCGTGCGGCTGCGCGGCGACCTCGCCCCGGGCACGAGGCTGAGCGAGGGAGCGCGTCCGTTCGTCCTCTACGAGCTGCCCGCGCCGTTCGCCACGCAGCCGATGCCGCGGTGGATCCACGTCGCGCGCTCGATCGAGATCCTCGAGGTTCTCGACGACGGCGCCGTCATCGCCGAGACCGCGGTCGACGGCGAGACGTGGTCCGAGCTGCCCGTGGCCATCACGCCGGCCGCGCCGCCCGCGGCGGGCAACCAGCAGACCGCGATCGACGAGTGGGCCGACGCCGTGGTCGCGGCTGCTCCCGGCTTCCCCGCCGACCCCGCGACCGACGTGCTCCGCCGCGTGCCGCCGCGCACACTCTCCGGCGGGGCGCTCGCGCACGGCGGCGTCGACGTCGACGACGTCTCGGCCATCGTGGCCAGCGTGCGCGACCTCGACGGCAGCTACCTCGCCGTGCAGGGCCCTCCGGGAACCGGCAAGACCTACGTCGGATCCCACGTCATCGAGCGCCTGGTCCGCGAGCACCGGTACAAGGTCGGCGTCGTCGCCCAATCGCACGCGGTGGTCGAGCACATGCTCGATCAGGTGGTCGCGGCGGGCGTGGCATCCGCGCGCGTGGGCAAGGCGCTCAAGAGCGGAGCCGAGGCCGAGGTCTCGTTCACCGTCTTCCCGAAGAACGGGATCGGAGCGTTCGTCGAGGAGCACGCGGACGAGGGATTCGTCGTCGGCGGCACCGCGTGGGACTTCAGCCACGCCGGCCGCATCCCGCGGCGGTCGCTCGACCTCCTCGTGATCGACGAGGCCGGGCAGTTCTCGCTCGCCTCGACGATCGCGGTGTCGGCGGCCGCCCAGCGTCTCCTGCTCCTGGGCGACCCCCAGCAGCTGCCGCAGGTCAGTCAGGGCACGCATCCCGAGCCCGTCGACGGCTCCGCGCTCGGATGGGTGATGGACGGCGCGGCGGTGATCCCGCGCGGGCTCGGGTACTTCCTGGCGCGGTCATGGCGGATGCATCCCGCGGTCGCCGCGGCGGTCTCGGAGCTGTCGTACGCGGGCGAGCTCGCCTCGCATCCCAGCACCGCGCTGCGGAGCCTCTCCGGGATCGAGGCCGGGGTCCACGCCGTCCCGGTCGCGCACCACGGCAACGCGACGCAGTCGCCCGAGGAGGCCGCACGTGTGGTCGAGATCGTCCGCGACCTGGTCGGCCGCGACTGGACCGACGTGTCGGGGGAGCAGGTCGCCCCGCCCCGCCCCCTCGAACCGCGCGACATCATCGTCGTCACGCCCTACAACGCGCAGCAGGTGATGGTCGAGGAGGCTCTGGCCTCCGCCGGCTTCGGCGACGTCCCCGTCGGGACGGTCGACCGCTTCCAGGGCCAGGAGGCGGCCGTCTCGATCGTGTCGCTCGCGGCGTCTTCGGGCCGCGACGCCCCTCGTGGGCTGGAGTTCCTGCTCCTGCAGAACCGGCTGAACGTCGCCGTCTCGCGCGCGAAGTACGCCGCCTACGTGGTCTACGCGCCCGGCGTGCTCGACGACTTGCCGCGCACCCCCGACGGCGTCGCGCGGCTGAGCGCGTTCGCGCGTCTGGTGGGAGCCGCATGA
PROTEIN sequence
Length: 1197
MRYIPDEGRIVWSASDLKAAAECEFAWLRAIDAKLGRVAPVDDPADATLERAGRLGTEHEQRVLESYRDVFGPAVAEIPETSSADAGGLAAAVEATRVALADAAMRVVYQAAFATPDFVGFADFLVRDDAGRWIVQDSKLARHARVTALMQLAAYADQLDRLGVPRSSRVELLLGDGTTSTHESADLMPVFRLRRERLRALVADRHVEAGAEHPAIAWGDPRGELGVVACGRCATCDLEVVASRDLLLVAGMRPVQRERLRAAGIASIDALATATAPPARMSADTFAMLRTQARLQLASPAGVPVPAVVPAAPVPVGAPVTATALADAATVAAPEAAPAVPTYEVVFPTALGALPRPDHGDIFFDFEGDPLYTEGPAREWGIDYLFGWVDDREQYSALWAHSFAEERVALETFLDLVALRRSQHPGMHIYHYAPYEPNHLLAMAARHGVRESDVDRLLRDGVFVDLYPIVRRALRVGSRSYSIKKLEPLYMGDEVRTSDVQKGDESIVRYVEARGLVADGREAEARDVFADLADYNRYDCVSTRRLRDWLVDRAREAGLRPSVDVEPGEAGYAPSPRAESLERLAAARAAAAGTPDDADAEALRLGAAAIDYYPREAKTFWATHFLRLREPVSVWEDARDVVVVDADRSEVVEDWHPGPRAVRRIVRLRGDLAPGTRLSEGARPFVLYELPAPFATQPMPRWIHVARSIEILEVLDDGAVIAETAVDGETWSELPVAITPAAPPAAGNQQTAIDEWADAVVAAAPGFPADPATDVLRRVPPRTLSGGALAHGGVDVDDVSAIVASVRDLDGSYLAVQGPPGTGKTYVGSHVIERLVREHRYKVGVVAQSHAVVEHMLDQVVAAGVASARVGKALKSGAEAEVSFTVFPKNGIGAFVEEHADEGFVVGGTAWDFSHAGRIPRRSLDLLVIDEAGQFSLASTIAVSAAAQRLLLLGDPQQLPQVSQGTHPEPVDGSALGWVMDGAAVIPRGLGYFLARSWRMHPAVAAAVSELSYAGELASHPSTALRSLSGIEAGVHAVPVAHHGNATQSPEEAARVVEIVRDLVGRDWTDVSGEQVAPPRPLEPRDIIVVTPYNAQQVMVEEALASAGFGDVPVGTVDRFQGQEAAVSIVSLAASSGRDAPRGLEFLLLQNRLNVAVSRAKYAAYVVYAPGVLDDLPRTPDGVARLSAFARLVGAA*