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SCN18_25_1_16_R2_B_scaffold_1040

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_1040_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3..1820)
DNA (1818bp) protein (606aa)
NAD+ synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364D87B
nadE; NAD synthase
NAD synthase {ECO:0000313|EMBL:BAJ75271.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_1_16_R2_B_scaffold_1040_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1867..2274)
DNA (408bp) protein (136aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Ribonuclease VapC n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSW3_BLASD
putative pilT protein, N-terminal, putative toxin of TAS system
SCN18_25_1_16_R2_B_scaffold_1040_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2271..2522)
DNA (252bp) protein (84aa)
Transcription factor-like protein {ECO:0000313|EMBL:KJQ54185.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Rv0623-like transcription factor
SCN18_25_1_16_R2_B_scaffold_1040_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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2615..6205
DNA (3591bp) protein (1197aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036FE048
DNA helicase {ECO:0000313|EMBL:KHK95635.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
superfamily I DNA and RNA helicase and helicase subunits
SCN18_25_1_16_R2_B_scaffold_1040_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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6202..6294
DNA (93bp) protein (31aa)
SCN18_25_1_16_R2_B_scaffold_1040_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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6284..6586
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D127D
Uncharacterized protein {ECO:0000313|EMBL:KHK95634.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_1040_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(6628..7260)
DNA (633bp) protein (211aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
uracil phosphoribosyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003711A52
upp; uracil phosphoribosyltransferase
SCN18_25_1_16_R2_B_scaffold_1040_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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7337..7765
DNA (429bp) protein (143aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FBAACF
cytosine/adenosine deaminase
SCN18_25_1_16_R2_B_scaffold_1040_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(7789..8721)
DNA (933bp) protein (311aa)
Pyrimidine monooxygenase RutA {ECO:0000313|EMBL:KJL36123.1}; EC=1.14.99.46 {ECO:0000313|EMBL:KJL36123.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
F420-dependent oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI000348F6A8
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
SCN18_25_1_16_R2_B_scaffold_1040_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(8722..9687)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031B85D7
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KHK95630.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
cation transporter
SCN18_25_1_16_R2_B_scaffold_1040_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9743..10870)
DNA (1128bp) protein (376aa)
alpha/beta hydrolase n=2 Tax=Microbacterium sp. B19 RepID=UPI00034644CA
hydrolase or acyltransferase
Predicted hydrolase or acyltransferase {ECO:0000313|EMBL:BAJ75276.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_1_16_R2_B_scaffold_1040_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

10960..11802
DNA (843bp) protein (281aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YSW1_9MICO
proC; pyrroline-5-carboxylate reductase
SCN18_25_1_16_R2_B_scaffold_1040_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11820..12491)
DNA (672bp) protein (224aa)
TrkA-N domain protein n=2 Tax=Microbacterium RepID=H8E3V2_9MICO
Potassium transporter {ECO:0000313|EMBL:KIC56574.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
trkA; K+ transport systems, NAD-binding component
SCN18_25_1_16_R2_B_scaffold_1040_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(12484..13278)
DNA (795bp) protein (265aa)
Trk-type K+ transport systems, membranecomponents n=1 Tax=Microbacterium sp. TS-1 RepID=U2X8T2_9MICO
Trk-type K+ transport systems, membranecomponents {ECO:0000313|EMBL:GAD33781.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
trkH; Trk-type K+ transport systems, membrane components
Displaying 14 items

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