ggKbase home page

SCN18_25_1_16_R2_B_scaffold_278

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_278_31
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25477..25890)
DNA (414bp) protein (138aa)
Rhodanese-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJB3_NITHX
rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:ABE63684.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_278_32
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25895..27070)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P595_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35899.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_278_33
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27259..27504
DNA (246bp) protein (82aa)
Transglycosylase-associated protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJB2_NITHX
transglycosylase-associated protein
Transglycosylase-associated protein {ECO:0000313|EMBL:ABE63685.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_278_34
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27604..28446
DNA (843bp) protein (281aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HPN6_9BRAD
ATPase
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ERF86401.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCN18_25_1_16_R2_B_scaffold_278_35
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28609..30111
DNA (1503bp) protein (501aa)
FAD-containing monooxygenase EthA n=1 Tax=Bradyrhizobium elkanii RepID=UPI000317DA5D
FAD-containing monooxygenase EthA {ECO:0000313|EMBL:KJC52807.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
flavin-binding family monooxygenase
SCN18_25_1_16_R2_B_scaffold_278_36
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30142..31833)
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034CB15F
Uncharacterized protein {ECO:0000313|EMBL:EKS41091.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_278_37
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32034..32627)
DNA (594bp) protein (198aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJB1_NITHX
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABE63686.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_278_38
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32648..33577)
DNA (930bp) protein (310aa)
Possible gluconolactonase {ECO:0000313|EMBL:CAE29065.1}; EC=3.1.1.17 {ECO:0000313|EMBL:CAE29065.1};; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
Possible gluconolactonase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N3R9_RHOPA
gluconolactonase
SCN18_25_1_16_R2_B_scaffold_278_39
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33888..35117
DNA (1230bp) protein (410aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036F1A3D
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC61048.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
putative ABC-type branched-chain amino acid transporter
SCN18_25_1_16_R2_B_scaffold_278_40
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35184..35558)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPP6_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05745.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_25_1_16_R2_B_scaffold_278_41
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35754..35960
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210I9_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KIZ37104.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_278_42
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36460..37563)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDU8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF82983.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
LuxR family transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_278_43
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37817..39430
DNA (1614bp) protein (538aa)
Argininosuccinate lyase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QT98_9BURK
Argininosuccinate lyase {ECO:0000313|EMBL:ETF02234.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
putative argininosuccinate lyase
SCN18_25_1_16_R2_B_scaffold_278_44
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39557..40753)
DNA (1197bp) protein (399aa)
MFS transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035DD5BA
Major facilitator superfamily transporter {ECO:0000313|EMBL:EJZ30222.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
major facilitator superfamily transporter
SCN18_25_1_16_R2_B_scaffold_278_45
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40815..41615
DNA (801bp) protein (267aa)
Phosphohydrolase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IFC1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44309.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_278_46
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41838..42287)
DNA (450bp) protein (150aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W3Z3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJZ31318.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_278_47
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42310..44016)
DNA (1707bp) protein (569aa)
Benzoate-CoA ligase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HK72_9BRAD
Benzoate-CoA ligase {ECO:0000313|EMBL:ERF84866.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
AMP-dependent synthetase and ligase
SCN18_25_1_16_R2_B_scaffold_278_48
unknown

Not on your lists

comp(44081..44188)
DNA (108bp) protein (36aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_278_49
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44172..44669)
DNA (498bp) protein (166aa)
Putative transcriptional regulatory protein, MarR family n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6Z5_9BRAD
Putative transcriptional regulatory protein, MarR family {ECO:0000313|EMBL:CCE02222.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
MarR family transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_278_50
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44687..47035)
DNA (2349bp) protein (783aa)
NADPH dehydrogenase {ECO:0000313|EMBL:CCD87608.1}; EC=1.6.99.1 {ECO:0000313|EMBL:CCD87608.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
NADPH dehydrogenase (EC:1.6.99.1)
NADPH dehydrogenase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S081_9BRAD
SCN18_25_1_16_R2_B_scaffold_278_51
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47151..47987)
DNA (837bp) protein (279aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Bll6081 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HB3_BRADU
Bll6081 protein {ECO:0000313|EMBL:BAC51346.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCN18_25_1_16_R2_B_scaffold_278_52
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48036..48797)
DNA (762bp) protein (254aa)
Short-chain alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WL97_9BRAD
Oxidoreductase {ECO:0000313|EMBL:EJZ31305.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
oxidoreductase
SCN18_25_1_16_R2_B_scaffold_278_53
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48968..49777
DNA (810bp) protein (270aa)
hydrolase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036289E1
3-oxoadipate enol-lactonase II {ECO:0000313|EMBL:AHY53150.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hydrolase
SCN18_25_1_16_R2_B_scaffold_278_54
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49774..51060
DNA (1287bp) protein (429aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQP8_9BRAD
BEC protein {ECO:0000313|EMBL:KGT74603.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
BEC protein
SCN18_25_1_16_R2_B_scaffold_278_55
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51255..52757
DNA (1503bp) protein (501aa)
acid--CoA ligase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003792A68
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EIG62103.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
putative acid--CoA ligase
SCN18_25_1_16_R2_B_scaffold_278_56
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52754..53848
DNA (1095bp) protein (365aa)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJX3_9BRAD
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:EHR04684.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
putative opine dehydrogenase
SCN18_25_1_16_R2_B_scaffold_278_57
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53845..54837
DNA (993bp) protein (331aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CV88_9BRAD
Putative 3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KGJ66548.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCN18_25_1_16_R2_B_scaffold_278_58
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54834..55307)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZBK6_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM91263.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
Displaying items 31-58 of 58 in total

View Taxonomy