Consensus taxonomy:
SCN18_25_1_16_R2_B_concoct_076
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
SCN18_25_1_16_R2_B_scaffold_80
Species:
SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (99.71%)
|
344 | 368140 bp | 63.00 | 30.79 | 89.47 | |
SCN18_25_1_16_R2_B_scaffold_22
Order:
Rhizobiales (58.23%)
|
328 | 359291 bp | 61.03 | 29.79 | 92.37 | |
SCN18_25_1_16_R2_B_scaffold_124
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (60.27%)
|
292 | 302627 bp | 61.71 | 28.53 | 88.47 | |
SCN18_25_1_16_R2_B_scaffold_50
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (51.27%)
|
236 | 237170 bp | 62.33 | 29.79 | 89.63 | |
SCN18_25_1_16_R2_B_scaffold_100
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (61.86%)
|
236 | 232902 bp | 63.76 | 31.74 | 86.88 | |
SCN18_25_1_16_R2_B_scaffold_116
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (56.89%)
|
225 | 254910 bp | 61.86 | 28.86 | 88.02 | |
SCN18_25_1_16_R2_B_scaffold_53
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (99.55%)
|
222 | 228104 bp | 62.48 | 30.49 | 86.89 | |
SCN18_25_1_16_R2_B_scaffold_152
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (54.13%)
|
218 | 211323 bp | 62.49 | 30.65 | 86.22 | |
SCN18_25_1_16_R2_B_scaffold_75
Order:
Rhizobiales (70.92%)
|
196 | 191985 bp | 61.51 | 28.03 | 84.65 | |
SCN18_25_1_16_R2_B_scaffold_56
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
|
193 | 223233 bp | 62.15 | 29.91 | 89.61 | |
SCN18_25_1_16_R2_B_scaffold_144
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (57.37%)
|
190 | 192909 bp | 63.26 | 31.41 | 88.66 | |
SCN18_25_1_16_R2_B_scaffold_94
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (66.47%)
|
173 | 167507 bp | 63.02 | 30.94 | 90.18 | |
SCN18_25_1_16_R2_B_scaffold_109
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (98.08%)
|
156 | 149176 bp | 62.88 | 30.32 | 87.40 | |
SCN18_25_1_16_R2_B_scaffold_105
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (59.44%)
|
143 | 153393 bp | 63.50 | 31.33 | 88.53 | |
SCN18_25_1_16_R2_B_scaffold_129
Order:
Rhizobiales (76.22%)
|
143 | 143247 bp | 61.03 | 30.28 | 90.60 | |
SCN18_25_1_16_R2_B_scaffold_145
Phylum:
Proteobacteria (59.85%)
|
137 | 117491 bp | 59.12 | 26.86 | 81.26 | |
SCN18_25_1_16_R2_B_scaffold_226
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (51.11%)
|
135 | 131375 bp | 62.12 | 28.53 | 85.67 | |
SCN18_25_1_16_R2_B_scaffold_120
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (64.39%)
|
132 | 137265 bp | 63.26 | 31.69 | 88.97 | |
SCN18_25_1_16_R2_B_scaffold_133
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (76.42%)
|
123 | 128129 bp | 63.78 | 31.15 | 90.36 | |
SCN18_25_1_16_R2_B_scaffold_151
Order:
Rhizobiales (68.1%)
|
116 | 111819 bp | 61.79 | 28.87 | 91.40 | |
SCN18_25_1_16_R2_B_scaffold_163
Order:
Rhizobiales (74.78%)
|
115 | 101763 bp | 62.17 | 28.49 | 84.08 | |
SCN18_25_1_16_R2_B_scaffold_170
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (71.28%)
|
94 | 98526 bp | 62.86 | 31.52 | 90.60 | |
SCN18_25_1_16_R2_B_scaffold_231
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (58.67%)
|
75 | 68383 bp | 62.61 | 30.58 | 90.45 | |
SCN18_25_1_16_R2_B_scaffold_212
Order:
Rhizobiales (75%)
|
68 | 75395 bp | 62.77 | 31.05 | 89.91 | |
SCN18_25_1_16_R2_B_scaffold_229
Order:
Rhizobiales (57.35%)
|
68 | 73191 bp | 61.39 | 29.77 | 88.57 | |
SCN18_25_1_16_R2_B_scaffold_243
Class:
Alphaproteobacteria (52.46%)
|
61 | 64187 bp | 58.51 | 25.73 | 88.45 | |
SCN18_25_1_16_R2_B_scaffold_265
Class:
Alphaproteobacteria (54.1%)
|
61 | 61591 bp | 58.87 | 26.33 | 89.60 | |
SCN18_25_1_16_R2_B_scaffold_278
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (62.07%)
|
58 | 55307 bp | 63.65 | 30.82 | 87.43 | |
SCN18_25_1_16_R2_B_scaffold_296
Order:
Rhizobiales (70.69%)
|
58 | 59231 bp | 61.16 | 28.02 | 71.51 | |
SCN18_25_1_16_R2_B_scaffold_323
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (67.31%)
|
52 | 44936 bp | 63.54 | 29.92 | 86.92 | |
SCN18_25_1_16_R2_B_scaffold_327
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
|
40 | 44481 bp | 61.35 | 29.51 | 88.32 | |
SCN18_25_1_16_R2_B_scaffold_493
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (75.86%)
|
29 | 26777 bp | 63.41 | 31.07 | 85.43 | |
SCN18_25_1_16_R2_B_scaffold_455
Order:
Rhizobiales (55.56%)
|
27 | 29045 bp | 60.26 | 27.68 | 84.46 | |
SCN18_25_1_16_R2_B_scaffold_499
Species:
SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (100%)
|
25 | 26479 bp | 64.07 | 33.21 | 88.51 | |
SCN18_25_1_16_R2_B_scaffold_647
Order:
Rhizobiales (58.33%)
|
24 | 19641 bp | 56.03 | 23.72 | 68.58 | |
SCN18_25_1_16_R2_B_scaffold_454
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (56.52%)
|
23 | 29126 bp | 62.05 | 29.26 | 85.83 | |
SCN18_25_1_16_R2_B_scaffold_663
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (65%)
|
20 | 19211 bp | 61.98 | 28.76 | 89.79 | |
SCN18_25_1_16_R2_B_scaffold_732
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (70%)
|
20 | 17814 bp | 61.82 | 28.66 | 87.79 | |
SCN18_25_1_16_R2_B_scaffold_1157
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
|
14 | 12983 bp | 62.96 | 31.03 | 84.99 | |
SCN18_25_1_16_R2_B_scaffold_884
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
|
14 | 15201 bp | 62.42 | 30.74 | 86.19 | |
SCN18_25_1_16_R2_B_scaffold_1031
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (83.33%)
|
12 | 13311 bp | 64.22 | 33.64 | 90.83 | |
SCN18_25_1_16_R2_B_scaffold_3192
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
|
10 | 5798 bp | 56.47 | 27.22 | 58.88 | |
SCN18_25_1_16_R2_B_scaffold_2567
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
|
8 | 6729 bp | 58.37 | 25.28 | 72.72 | |
SCN18_25_1_16_R2_B_scaffold_2064
Species:
SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
|
8 | 7826 bp | 64.64 | 32.76 | 88.93 | |
SCN18_25_1_16_R2_B_scaffold_8345
Species:
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (75%)
|
4 | 2969 bp | 62.24 | 99.33 | 95.39 | |
SCN18_25_1_16_R2_B_scaffold_6803
Species:
SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (100%)
|
3 | 3451 bp | 65.26 | 7.61 | 91.19 | |
SCN18_25_1_16_R2_B_scaffold_15182
Species:
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (66.67%)
|
3 | 1848 bp | 69.64 | 6.41 | 94.64 |