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SCN18_25_1_16_R2_B_scaffold_145

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_145_1
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187..360
DNA (174bp) protein (58aa)
Transposase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y8S1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKN78191.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
IS66 Orf2 family protein
SCN18_25_1_16_R2_B_scaffold_145_2
unknown

Not on your lists

478..1014
DNA (537bp) protein (179aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(942..2510)
DNA (1569bp) protein (523aa)
ORF_14 n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XP09_ALCXX
ORF_14
ORF_14 {ECO:0000313|EMBL:CCH06341.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-1996.;"
SCN18_25_1_16_R2_B_scaffold_145_4
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2571..3905)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PH52_MARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP98155.1}; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter adhaerens (strain HP15).;"
SCN18_25_1_16_R2_B_scaffold_145_5
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4230..5519)
DNA (1290bp) protein (430aa)
Membrane protein n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PH51_MARAH
membrane protein
Membrane protein {ECO:0000313|EMBL:ADP98154.1}; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter adhaerens (strain HP15).;"
SCN18_25_1_16_R2_B_scaffold_145_6
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5947..7770
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DPN3_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL08999.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_25_1_16_R2_B_scaffold_145_7
unknown

Not on your lists

comp(7671..7934)
DNA (264bp) protein (88aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_8
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7993..8889)
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CCH06364.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CCH06364.1};; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-1996.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XP57_ALCXX
SCN18_25_1_16_R2_B_scaffold_145_9
SCNPILOT_EXPT_750_P_Thiobacillus_65_1100, SCNPILOT_EXPT_750_P_Thiobacillus_65_1100, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9088..10233
DNA (1146bp) protein (382aa)
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0003088633
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCN18_25_1_16_R2_B_scaffold_145_10
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10295..11437
DNA (1143bp) protein (381aa)
Aminotransferase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K8Y7_AZOSB
TDP-4-oxo-6-deoxy-D-glucose aminotransferase {ECO:0000313|EMBL:KJC56305.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
TDP-4-oxo-6-deoxy-D-glucose transaminase
SCN18_25_1_16_R2_B_scaffold_145_11
unknown

Not on your lists

11543..12097
DNA (555bp) protein (185aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_12
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12185..12961)
DNA (777bp) protein (259aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I2C1_9BRAD
Methyltransferase type 12 {ECO:0000313|EMBL:KJC36684.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
type 12 methyltransferase
SCN18_25_1_16_R2_B_scaffold_145_13
SCNpilot_P_inoc_Xanthomonadales_63_13, SCNpilot_P_inoc_Xanthomonadales_63_13, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13099..14136)
DNA (1038bp) protein (346aa)
Glycosyl transferase, family 2 n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ASL7_9RHOB
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EDZ40635.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2083.;"
glycosyl transferase family protein
SCN18_25_1_16_R2_B_scaffold_145_14
unknown

Not on your lists

comp(14108..14338)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003630EDE
SCN18_25_1_16_R2_B_scaffold_145_15
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14354..15280)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI000371544D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJI56788.1}; TaxID=28110 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella.;" source="Francisella philomiragia.;"
SCN18_25_1_16_R2_B_scaffold_145_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15294..16214)
DNA (921bp) protein (307aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA076-D02 RepID=UPI00036DF33A
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
SCN18_25_1_16_R2_B_scaffold_145_17
unknown

Not on your lists

comp(16233..16571)
DNA (339bp) protein (113aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_18
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17060..17623
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C2K5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN66981.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
type 12 methyltransferase
SCN18_25_1_16_R2_B_scaffold_145_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17671..18015
DNA (345bp) protein (115aa)
Putative membrane protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K7I8_9BACE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EFI37688.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
SCN18_25_1_16_R2_B_scaffold_145_20
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18243..19520
DNA (1278bp) protein (426aa)
O-antigen polymerase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPX7_NITWN
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ABA05664.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_25_1_16_R2_B_scaffold_145_21
unknown

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comp(19533..19754)
DNA (222bp) protein (74aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_22
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20468..20701
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUJ4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36346.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCN18_25_1_16_R2_B_scaffold_145_23
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21223..22419
DNA (1197bp) protein (399aa)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJS5_9BRAD
CoA-transferase {ECO:0000313|EMBL:KJC56317.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_145_24
unknown

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comp(24420..24539)
DNA (120bp) protein (40aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_25
unknown

Not on your lists

comp(24662..24772)
DNA (111bp) protein (37aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_26
unknown

Not on your lists

comp(24824..25042)
DNA (219bp) protein (73aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_27
unknown

Not on your lists

comp(25042..25473)
DNA (432bp) protein (144aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_28
unknown

Not on your lists

comp(25693..26253)
DNA (561bp) protein (187aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_29
unknown

Not on your lists

comp(26284..26388)
DNA (105bp) protein (35aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_145_30
unknown

Not on your lists

comp(26406..26681)
DNA (276bp) protein (92aa)

This feature has no annotations

Displaying items 1-30 of 137 in total

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