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SCN18_25_1_16_R2_B_scaffold_100_229

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 225152..225493

Top 3 Functional Annotations

Value Algorithm Source
Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N5I8_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 113.0
  • Bit_score: 157
  • Evalue 5.40e-36
5-carboxymethyl-2-hydroxymuconate delta-isomerase similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 113.0
  • Bit_score: 157
  • Evalue 1.50e-36
Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase {ECO:0000313|EMBL:CAE28427.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 113.0
  • Bit_score: 157
  • Evalue 7.50e-36

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGCCTCATCTTGTGATCGAATATTCCGAGGGCGCCGTGAGCCGGGAGGAGGTGAGCCATCTGATGGAGCAGCTTGCCTCCGCCGCGGCACGGACCGGCGTCATGAAGGCGTCCGACATCAAGGTGCGGGCACGAAGCTATGACGATTTTCTGATCGCAGGCAAAAAGGACAGCTTCATTCATCTGTCGGTCTATTTGCTTGCAGGAAGAACACCGGAACAGAAGGTCGATCTCAGTGAACAGCTGCGGCAAGTGATGATTGAAAGCTGTGCGAACGTCGTCAGCCTGAGCGTTGACATCCGTGACATGGATCCTGTCGCTTACAAGAAGCGGCTGAAATGA
PROTEIN sequence
Length: 114
MPHLVIEYSEGAVSREEVSHLMEQLASAAARTGVMKASDIKVRARSYDDFLIAGKKDSFIHLSVYLLAGRTPEQKVDLSEQLRQVMIESCANVVSLSVDIRDMDPVAYKKRLK*