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SCN18_25_1_16_R2_B_scaffold_105_5

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(3298..3903)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 201.0
  • Bit_score: 399
  • Evalue 2.00e-108
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 201.0
  • Bit_score: 397
  • Evalue 1.20e-108
isopropylmalate isomerase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003821D6C similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 201.0
  • Bit_score: 400
  • Evalue 6.50e-109

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGACAAGTTCACCACGCTGGAAGGCGTCGCAGCGCCGCTGAAGATCATCAACGTCGACACCGACATGATCATTCCGAAGCAGTATCTGAAGACCATCAAGCGCACGGGCCTTGGCAAGGGGCTTTTCTCGGAACAGCGCTACAAGGACGACGGTTCGGAGAATCCGGATTTCATTCTCAACAAGCCAGCCTATCGCAACGCCAAGGTCCTGGTCGCCGGCGACAACTTCGGTTGCGGCTCCTCGCGCGAGCACGCGCCATGGGCGCTGCTCGACTTCGGCATCCGCTGCGTGATCTCGACCTCGTTCGGCGACATCTTCTACAACAACTGCTTCAAGAACGGCATTCTCCCGATCCGCGTGTCGCAGGAGAACCTCGACAAGCTGTTCGATGACGCCGAGCGCGGCGCCAATGCGACGCTGACCATCGATCTCGCCAGTCAGGAAATCCGCGGCCCCGACGGCGGCACCGTGAAGTTCGAGATCGATCCGTTCCGCAAGCATTGCCTGCTGAACGGCCTCGATGACATCGGTCTGACGATGGAAAAGAAATCGTCGATCGACAGTTACGAGGACAAGCTGAAGCGCGAACGCGCCTGGGCCTGA
PROTEIN sequence
Length: 202
MDKFTTLEGVAAPLKIINVDTDMIIPKQYLKTIKRTGLGKGLFSEQRYKDDGSENPDFILNKPAYRNAKVLVAGDNFGCGSSREHAPWALLDFGIRCVISTSFGDIFYNNCFKNGILPIRVSQENLDKLFDDAERGANATLTIDLASQEIRGPDGGTVKFEIDPFRKHCLLNGLDDIGLTMEKKSSIDSYEDKLKRERAWA*