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SCN18_25_1_16_R2_B_scaffold_105_36

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(30935..31699)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR-family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWS0_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 225.0
  • Bit_score: 233
  • Evalue 2.30e-58
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 232.0
  • Bit_score: 235
  • Evalue 1.70e-59
GntR family transcriptional regulator {ECO:0000313|EMBL:AIB16173.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 232.0
  • Bit_score: 235
  • Evalue 8.40e-59

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
TTGCAAGATGGGTGGGTTAAATTGGATCAGGAAGCACGTCCTTACGACACAAGCAGCTTTCATCCGCCGCATAACAGTGATCGGGGTGCGGCTGCGCTACTACGCTTTATCGAAGGCAGCATCGCCGGCGGTATCTGGAAGCCGGGGGATCAGCTTCCAACTGAGCGTGAACTCGGTGCCCGCTTCGGGCTGGCGCGCAATACGCTGCGCAAACGGTTGAAGGTCCTCGAGAGCGAGGGACTCATCGTCCGGCGCGTCGGCAGCGGCTCCTTCGTCGCCCAGCCGCCCCGCCCGATCGCCGAAGTTCCCAATCCGGGTCTTGCCCTGCTGACACGGATTCATGGGGCGAGCCCGTCCGAAGTGATGGAGCTGCGCCTGATGATCGAACCGCAGGTGATCGACCTGGCGGTGGCCCGGTCCACCACAGCCAATTTCAATACTCTGACCGAATGTCTCGAGCGCAGCGAGGCCGCAAAAACCACACCCGAGTTTGAGCTCTGGGACGGCCTGCTGCATCTCGAAATTCTCAGAGCGGCGCGCAATCAACTGCTGATCGACATCTATGACGCCTTGAATGGCGTCCGGCGGCAGGCACAGTGGGGCAAGTTGAAGGAACGGACGCTGACGCCCGAGGGACGCATTCTCTACGAGAAGCAGCATCGCGATATCGTCGGTGCCCTGAAAGCACGCGATGCGGTCACAGCGCGCGAAGCGCTGGTGTCCCACCTGAAGGCTGTGCGGGAGGCCCTGCTGGGCGCCATGTAG
PROTEIN sequence
Length: 255
LQDGWVKLDQEARPYDTSSFHPPHNSDRGAAALLRFIEGSIAGGIWKPGDQLPTERELGARFGLARNTLRKRLKVLESEGLIVRRVGSGSFVAQPPRPIAEVPNPGLALLTRIHGASPSEVMELRLMIEPQVIDLAVARSTTANFNTLTECLERSEAAKTTPEFELWDGLLHLEILRAARNQLLIDIYDALNGVRRQAQWGKLKERTLTPEGRILYEKQHRDIVGALKARDAVTAREALVSHLKAVREALLGAM*