ggKbase home page

SCN18_25_1_16_R2_B_scaffold_105_51

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 46780..47844

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D3B898 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 354.0
  • Bit_score: 699
  • Evalue 9.10e-199
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC57546.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 353.0
  • Bit_score: 690
  • Evalue 1.00e-195
rieske [2Fe-2S] domain-containing protein 5 similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 349.0
  • Bit_score: 347
  • Evalue 4.20e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGAACGACGACGGAATCTTCCTCTACAATTCCTGGTACGTGGCGGCCTGGAATCACGAACTGATCGACGGCAAGAAGCTGGCACGCACCATTCTTGAGAAACCGATCGTGCTGTATCGCGGTTCAAGCGGAAAGATCGTGGCGCTGGACGATCGCTGCTGTCATCGCGCCGCGCCGCTCTCGATGGGCCGCGTCGAGGGCGACGACATCCGCTGCATGTATCACGGGATGAAGTTCGCCTCCGACGGCAAATGCATCCAGATCCCCGGCCAGGACATCATCCCGGCCAAGCTCGGCGTGCGCAGTTATCCCGTGGTCGAGCGCTACAATCTGGTCTTCATCTGGACCGGCGACCCCGAGAAGGCCGATCCGAATCTCATCCTCGACTATCCCCCGCTCTCCGATCCGAAGTGGCGCGGTCTGCCCGGCTATATGCACTACAAGGCGAACTGGCTTCTCATCGTCGATAACCTGTCCGATTTCGCGCATCTCGCTTTCGTGCACACCAACACGCTCGGCGGCTCCGAGGAATACGCCTACAAGACCAAGCCGGTCGCGATCGAGAAGCTGGATGACGGCTTCCGTGTCGAGCGCTGGCACATGGGCGCGGAGCCGCCGCCCTACCACAAGAAGGTCATCGCGAACAAAACCGACAAGATCGATCGCCGCAATATCGGCCGTATGCTGATTCCCGGCACCTTCACGCTCGACACCACGTTCGCGCCCGCGGGACAGGGTGTGGAGAAGGGTGTCGACGTTCCCGGCACGCGGTCTTATCGCAACGCGCAGTTCATGACGCCGGAAACGCGCTCGTCCACCCACTTCTTCTGGAATTACCTGCACGATTTCGACATCGACGATCCGAACATCGCGCTGTCGCTGCGCCACTCGCTGGAAGAAGGCTTCAACGAGGACAAGGACATCATCGAAGCCCAGCAGAAGGTGTTCGATGCCGACCCGAACTACCAGTTGCTTGCGATCGGCGCCGACGCGCCGCTGACCTACTTCCGCTGGTTGTTCTCGCGCAAGCTCGAAGCCGAGAGAAGCGCGGCTCGCGCGGCCTGA
PROTEIN sequence
Length: 355
MNDDGIFLYNSWYVAAWNHELIDGKKLARTILEKPIVLYRGSSGKIVALDDRCCHRAAPLSMGRVEGDDIRCMYHGMKFASDGKCIQIPGQDIIPAKLGVRSYPVVERYNLVFIWTGDPEKADPNLILDYPPLSDPKWRGLPGYMHYKANWLLIVDNLSDFAHLAFVHTNTLGGSEEYAYKTKPVAIEKLDDGFRVERWHMGAEPPPYHKKVIANKTDKIDRRNIGRMLIPGTFTLDTTFAPAGQGVEKGVDVPGTRSYRNAQFMTPETRSSTHFFWNYLHDFDIDDPNIALSLRHSLEEGFNEDKDIIEAQQKVFDADPNYQLLAIGADAPLTYFRWLFSRKLEAERSAARAA*