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SCN18_25_1_16_R2_B_scaffold_105_55

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 52591..53106

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FD68B1 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 155.0
  • Bit_score: 263
  • Evalue 1.40e-67
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 171.0
  • Bit_score: 254
  • Evalue 6.90e-65
rplU; 50S ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 171.0
  • Bit_score: 239
  • Evalue 6.00e-61

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGTTCGCAGTCATCAAAACCGGCGGCCGGCAGTACCGCGTCGTTCCGGATGATGTGCTCGAGATTGGCAAGATCGCCGGCGACGTCGGCACGATCGTGCAGCTTGGTGAAGTTCTGGTGCTCGGCGGCGATACGCCGGTGCTGGGTGCGCCGACGGTGGCCGGTGCATCGGTCGCGGCGGAAGTGCTGCAGCACAAGCGGGGCCCCAAGGTAATTTCGTTCAAGAAGCGCCGCCGCAAGAATTCGAAGCGCAAGCGCGGATATCGCGACGAGATCACGGTGCTGCGCATCACCGAGATCCTTGCGGACGGCAGCAAGCCGACAATCGGCCCGCGCCCGAAGAAGGAAAAGGTTGCGAAGCCGGAAGGCGACGACGCCGACGCGCCGAAGGCGGCGAAGAAGAAGGCGCCGGCCAAGAAGGCCGCCGCAGCCAAGGCTCCCGCCAAGAAGGCTCCGGCGAAAAAGGCCGCTGCCAAGAAGGCGCCGGCGAAGAAAGCCGCGAAGAGCGAAAAGTAA
PROTEIN sequence
Length: 172
MFAVIKTGGRQYRVVPDDVLEIGKIAGDVGTIVQLGEVLVLGGDTPVLGAPTVAGASVAAEVLQHKRGPKVISFKKRRRKNSKRKRGYRDEITVLRITEILADGSKPTIGPRPKKEKVAKPEGDDADAPKAAKKKAPAKKAAAAKAPAKKAPAKKAAAKKAPAKKAAKSEK*