ggKbase home page

SCN18_25_1_16_R2_B_scaffold_454_2

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(303..2264)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein n=1 Tax=Afipia birgiae RepID=UPI0002D3A1E4 similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 653.0
  • Bit_score: 861
  • Evalue 4.40e-247
Uncharacterized protein {ECO:0000313|EMBL:EKS38536.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 653.0
  • Bit_score: 847
  • Evalue 9.10e-243
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 653.0
  • Bit_score: 832
  • Evalue 6.10e-239

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1962
ATGCTCAAATTCAAGTCTATTTCAGTTCGTATCATGGTGGCGATTTCACTCGTCGCGGCGGCGTCGTGCGCAGCGCTGGCAGCCTTCGGCCTGTGGCGGCAGCAGACCACCATCAACCTGGCGCTGGATCGCGAACTGCACGACGACTATGCCAACATGACCGCGGCCATGGATGCCGACGCGAGAAGCGTGCTGGCCGTCGCCGAAACTCTCGCGCACATGCCCGAAGTGAAGGCCGTCGTGAAATCCGGCAATCGTGATGCGACGCTTGCGCTGCTCAACGACGCACTCGCGCATCTGAAGCCGCTCGGTATCGAACTGATCACCATCCAGGTTCCTCCAGCCATCACCTTCGCCCGCGTTCACAATCAAAAAGTGTTCGGCGACAACGTCTCCAAGCGGCGCAAGATGATCGTGAAGTCGATGGAGACCCACAAGTCGTTCCGCGGCATCGAAGCCGGCCACGACATTCTGAACATCTTCGGCGTCGCGCCGCTGATGGATGGAGACAAGATGCTGGCCACCGTCGATATCGGCCAGCCCTTTGGCGCGACCTTCGTCAAGATCATGAAATCCCGCTTCGGCGTCGATGTCGCGATCCATCAGATCACCGATGGAAAGGTGAAAACCCTGGCCTCGACGACGACGGATGTCCAACCGTCCGCAGAGCTCATGCAGCGCGTGATGGGTGGCACCACCGTCACGCAGACCGGAGAGCGGGCGGGCCGTCCGATTGCGGCGACGTTCGGACCGATCAGGAGTTTCTCAGGTGATCCGATCGCGGTTATCGAGATCGTGCGCGACGCGAGCCTCTATCAAAGCTATGCCCGTAGTTCGGCGGCATGGCTGGCCGGCGGCGCGCTCGCCGCGGTGTTGATTGCAGCGCTGTTCGCCGCATGGCTCGGTCGCGGCATGGCGAAGCCGATCCTCGCGCTGGAAGGCGCGATGCGTGAAATGACCTCGGGACGTCACGACATCGACGTCCCCGGTGCGAAGCGCAACGATGAAATCGGCTCCATGGCGCGTGCGGTCGATGTCTTCAAGGACAGTCTGATCGAGACCGATCGCCTGCGCACGGCGCAGGAGCAACAGCGCACCACGGCCGAAGGCGAGCGTCGCGCAACGCTGCATGCCCTCGCCTCGAGCTTCGAGAACGGCGTCGGCACCATCGTCGATTCAGTCGGGCGCGCCGCCACCGGCTTGCGCACCACAGCAGAGTCGATGTCGACCACCGCCGACGAAGCGATCCGCCAGACCACGACGGTCGCAGCTGCGTCCGAGGAGGCCTCGCAGAACGCCGAGGCCGTTGCCGCGGCGGTCGAAGAGCTCAACGCCTCGATCAACGAGATCGCCCAGCAGGTCAACGAATCCGCACGCGTCGCGGGCACGGCCGCCTCACAGGCCAACGACACCAACGCCCAGGTTCAGGGGTTGGCCAGCGCCGCGCAGAAGATCGGCGATGTCGTCAAGCTCATCAGCGAAATCGCAGAGCAGACAAACTTGTTGGCGCTGAACGCCACTATTGAGGCGGCGCGCGCCGGCGAGGCCGGCCGCGGTTTCGCCGTCGTCGCTTCGGAAGTGAAGGCGCTGGCAAGCCAGACCTCGAAGGCGACGGAAGAAATCTCGGCGCAGGTCGGCGCTATCCAGACTGCAACGCAGGCTTCGGTTGCGGCAATTCAGGGCATCAACGAGACCATCACCAAGGTCAACGAGATCGCCAGCGCGATCGCCTCGGCGGTGGAGGAGCAAGGCGCTGCCACCCGTGAAATCGCCCATAACGTGGCGGAAAGCGCGCGCGGCACCGGTCAGGTGTCGCAGCACATCTCCGGCGTCAATGAAGCCGCCCATCAGACTGGAACGGCGGCATCGCTCGTTGTGGAATCCGCTGCGGAACTCTCGAAGAACGGCGAAACGCTGCGCGCGCAGGTCGACGCCTTCCTGCGCGACGTCCGCGCGGCGTAA
PROTEIN sequence
Length: 654
MLKFKSISVRIMVAISLVAAASCAALAAFGLWRQQTTINLALDRELHDDYANMTAAMDADARSVLAVAETLAHMPEVKAVVKSGNRDATLALLNDALAHLKPLGIELITIQVPPAITFARVHNQKVFGDNVSKRRKMIVKSMETHKSFRGIEAGHDILNIFGVAPLMDGDKMLATVDIGQPFGATFVKIMKSRFGVDVAIHQITDGKVKTLASTTTDVQPSAELMQRVMGGTTVTQTGERAGRPIAATFGPIRSFSGDPIAVIEIVRDASLYQSYARSSAAWLAGGALAAVLIAALFAAWLGRGMAKPILALEGAMREMTSGRHDIDVPGAKRNDEIGSMARAVDVFKDSLIETDRLRTAQEQQRTTAEGERRATLHALASSFENGVGTIVDSVGRAATGLRTTAESMSTTADEAIRQTTTVAAASEEASQNAEAVAAAVEELNASINEIAQQVNESARVAGTAASQANDTNAQVQGLASAAQKIGDVVKLISEIAEQTNLLALNATIEAARAGEAGRGFAVVASEVKALASQTSKATEEISAQVGAIQTATQASVAAIQGINETITKVNEIASAIASAVEEQGAATREIAHNVAESARGTGQVSQHISGVNEAAHQTGTAASLVVESAAELSKNGETLRAQVDAFLRDVRAA*