ggKbase home page

SCN18_25_1_16_R2_B_scaffold_454_18

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 25958..26329

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=2 Tax=Oligotropha carboxidovorans RepID=RS12_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 123.0
  • Bit_score: 245
  • Evalue 1.60e-62
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 123.0
  • Bit_score: 245
  • Evalue 4.60e-63
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 123.0
  • Bit_score: 245
  • Evalue 2.30e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGCCGACGATCAACCAACTGATCGCTAAACCGCGCGCAATCCAGAAGGCGCGCAAGAAGGTGCCGGCGCTGCAGCAGTCGCCGCAGAAGCGCGGCGTGTGCACGCGCGTCTACACGACGACGCCGAAGAAGCCGAACTCGGCGCTTCGTAAGGTCGCGAAGGTGCGTCTCACCAATGGCTTCGAGGTCATCGGCTACATTCCGGGTGAAGGCCATAACCTTCAGGAACACTCGGTGGTCATGATCCGCGGCGGCCGCGTCAAGGACTTGCCCGGCGTGCGCTACCACATCCTCCGCGGCGTCCTCGACACCCAGGGCGTCAAGAACCGTAAGCAGCGCCGTTCGAAGTACGGCGCGAAGCGTCCGAAGTAA
PROTEIN sequence
Length: 124
MPTINQLIAKPRAIQKARKKVPALQQSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVIGYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHILRGVLDTQGVKNRKQRRSKYGAKRPK*