ggKbase home page

SCN18_25_1_16_R2_B_scaffold_1199

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_1199_1
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..483
DNA (483bp) protein (161aa)
SCN18_25_1_16_R2_B_scaffold_1199_2
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(745..2016)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCQ2_9MICO
Magnesium transporter MgtE {ECO:0000313|EMBL:KJL37853.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
MgtE intracellular region
SCN18_25_1_16_R2_B_scaffold_1199_3
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2084..3730)
DNA (1647bp) protein (549aa)
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter n=2 Tax=Microbacterium RepID=S3ABB7_9MICO
Divalent metal cation transporter MntH {ECO:0000313|EMBL:KJL37854.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
manganese transport protein
SCN18_25_1_16_R2_B_scaffold_1199_4
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4381..6738)
DNA (2358bp) protein (786aa)
UPI0003C7F5CE related cluster n=1 Tax=unknown RepID=UPI0003C7F5CE
Uncharacterized protein {ECO:0000313|EMBL:AJE39398.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_1199_5
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6735..7082)
DNA (348bp) protein (116aa)
UPI0003C7F6EE related cluster n=1 Tax=unknown RepID=UPI0003C7F6EE
Uncharacterized protein {ECO:0000313|EMBL:EHN75201.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
XRE family transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_1199_6
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7100..8212)
DNA (1113bp) protein (371aa)
integrase n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000372BD2B
Integrase {ECO:0000313|EMBL:EYT55771.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
recombinase
SCN18_25_1_16_R2_B_scaffold_1199_7
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8258..8530)
DNA (273bp) protein (91aa)
SCN18_25_1_16_R2_B_scaffold_1199_8
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8625..9269
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003748D35
Uncharacterized protein {ECO:0000313|EMBL:EYR65220.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_1199_9
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9513..10259
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Gordonia RepID=R7Y2U5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJR00248.1}; TaxID=1617449 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. no. 9.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_1199_10
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10464..11015
DNA (552bp) protein (184aa)
SCN18_25_1_16_R2_B_scaffold_1199_11
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11401..11814)
DNA (414bp) protein (138aa)
Two-component system, response regulator n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUP4_SACES
Two-component system, response regulator
Two-component system, response regulator {ECO:0000313|EMBL:CCH29646.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Displaying 11 items

View Taxonomy