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SCN18_25_1_16_R3_B_scaffold_8069

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R3_B_scaffold_8069_1
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2..604
DNA (603bp) protein (201aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABF5_9PROT
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KIO50091.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
SCN18_25_1_16_R3_B_scaffold_8069_2
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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601..963
DNA (363bp) protein (121aa)
Probable transmembrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIP0_9PROT
Probable transmembrane protein {ECO:0000313|EMBL:CCU62318.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_8069_3
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1092..1337
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI84_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49819.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_8069_4
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1393..1839
DNA (447bp) protein (149aa)
Probable transmembrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSF6_9PROT
Membrane protein {ECO:0000313|EMBL:KIO49818.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RDD
SCN18_25_1_16_R3_B_scaffold_8069_5
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1893..2303)
DNA (411bp) protein (137aa)
TldD protein, part of proposed TldE/TldD proteolytic complex n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGF5_9PROT
TldD protein, part of proposed TldE/TldD proteolytic complex {ECO:0000313|EMBL:CCU62321.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
peptidase U62, modulator of DNA gyrase
Displaying 5 items

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