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SCN18_25_1_16_R3_B_scaffold_2517

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R3_B_scaffold_2517_1
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2..619
DNA (618bp) protein (206aa)
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH53_9PROT
CDP-6-deoxy-delta-3,4-glucoseen reductase {ECO:0000313|EMBL:KIO48809.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CDP-6-deoxy-delta-3,4-glucoseen reductase
SCN18_25_1_16_R3_B_scaffold_2517_2
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(671..1891)
DNA (1221bp) protein (407aa)
Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (Unrelated to HemY-type PPO in GramPositives) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQZ7_9PROT
Heme biosynthesis protein HemY {ECO:0000313|EMBL:KIO48803.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
HemY-like
SCN18_25_1_16_R3_B_scaffold_2517_3
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1893..2960)
DNA (1068bp) protein (356aa)
Uroporphyrinogen-III synthase / Homolog of E. coli HemX protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFE7_9PROT
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KIO48802.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_2517_4
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2935..3756)
DNA (822bp) protein (274aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:CCU61857.1}; EC=4.2.1.75 {ECO:0000313|EMBL:CCU61857.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHB2_9PROT
SCN18_25_1_16_R3_B_scaffold_2517_5
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3753..4724)
DNA (972bp) protein (324aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:KIO48800.1}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000256|SAAS:SAAS00018413};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHM0_9PROT
SCN18_25_1_16_R3_B_scaffold_2517_6
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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4841..7093
DNA (2253bp) protein (751aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH56_9PROT
Displaying 6 items

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