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SCN18_25_1_16_R3_B_scaffold_396

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R3_B_scaffold_396_1
SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, Bacteria

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1..132
DNA (132bp) protein (44aa)
Transposase n=7 Tax=Alteromonas macleodii RepID=K7R8Y9_ALTMA
transposase
Uncharacterized protein {ECO:0000313|EMBL:AGP76572.1}; TaxID=1300253 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macleodii str. 'English Channel 615'.;"
SCN18_25_1_16_R3_B_scaffold_396_2
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(168..1553)
DNA (1386bp) protein (462aa)
Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=sulfur-oxidizing symbionts RepID=G2DEG4_9GAMM
Efflux family outer membrane protein {ECO:0000313|EMBL:EGV50982.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
efflux family outer membrane protein
SCN18_25_1_16_R3_B_scaffold_396_3
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(1556..1741)
DNA (186bp) protein (62aa)
SCN18_25_1_16_R3_B_scaffold_396_4
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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2330..3367
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PR37_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ87980.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
putative transmembrane protein
SCN18_25_1_16_R3_B_scaffold_396_5
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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3667..4026
DNA (360bp) protein (120aa)
SCN18_25_1_16_R3_B_scaffold_396_6
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(4394..6577)
DNA (2184bp) protein (728aa)
Silver exporting P-type ATPase {ECO:0000313|EMBL:KIE04080.1}; EC=3.6.3.53 {ECO:0000313|EMBL:KIE04080.1};; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC36.;"
silP; putative cation-transporting P-type ATPase (EC:3.6.3.-)
copper-exporting ATPase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AA0C
SCN18_25_1_16_R3_B_scaffold_396_7
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(7281..8681)
DNA (1401bp) protein (467aa)
Putative multicopper oxidase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5F7_HERAR
oxidase, copper oxidase
Tax=BJP_IG2069_Syntrophobacterales_47_18
SCN18_25_1_16_R3_B_scaffold_396_8
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(8691..10073)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030D087B
copper resistance-related protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R3_B_scaffold_396_9
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(10080..10388)
DNA (309bp) protein (103aa)
SCN18_25_1_16_R3_B_scaffold_396_10
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(10385..10915)
DNA (531bp) protein (177aa)
Membrane protein-like protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XPC4_HIRBI
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG59141.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
SCN18_25_1_16_R3_B_scaffold_396_11
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(10924..11271)
DNA (348bp) protein (116aa)
SCN18_25_1_16_R3_B_scaffold_396_12
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(11446..14577)
DNA (3132bp) protein (1044aa)
Cation efflux system protein cusA n=1 Tax=Legionella pneumophila (strain Corby) RepID=A5IFL7_LEGPC
Cation efflux system protein cusA
Cation efflux system protein cusA {ECO:0000313|EMBL:ADG24380.1}; TaxID=423212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy).;"
SCN18_25_1_16_R3_B_scaffold_396_13
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(14590..16044)
DNA (1455bp) protein (485aa)
lpa:lpa_01578 hypothetical protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB id=89100 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE25542.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conserved exported protein of unknown function
SCN18_25_1_16_R3_B_scaffold_396_14
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(16041..17321)
DNA (1281bp) protein (427aa)
lpc:LPC_2241 hypothetical protein id=89098 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE25543.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_396_15
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(17527..17676)
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI00037FCEDC
putative shikimate kinase I
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_38_11_curated
SCN18_25_1_16_R3_B_scaffold_396_16
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(18017..18565)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI00036F56EB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ47317.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
SCN18_25_1_16_R3_B_scaffold_396_17
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(18569..19564)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EBN7_9BACT
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:KKQ05895.1}; TaxID=1618769 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF1_36_47.;"
peptidase S66
SCN18_25_1_16_R3_B_scaffold_396_18
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(19590..20606)
DNA (1017bp) protein (339aa)
protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG57205.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
SCN18_25_1_16_R3_B_scaffold_396_19
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(20707..20940)
DNA (234bp) protein (78aa)
N-acetyltransferase GCN5 n=1 Tax=Oceanibaculum indicum P24 RepID=K2IX45_9PROT
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EKE67463.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_396_20
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(20950..22446)
DNA (1497bp) protein (499aa)
SCN18_25_1_16_R3_B_scaffold_396_21
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(22453..25068)
DNA (2616bp) protein (872aa)
Conjugal transfer protein TrbA n=1 Tax=Sphingobium baderi LL03 RepID=T0GJH7_9SPHN
conjugal transfer protein TraA
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCN18_25_1_16_R3_B_scaffold_396_22
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

25397..25690
DNA (294bp) protein (98aa)
Putative mobilization protein n=1 Tax=Fluoribacter dumoffii RepID=A8QYS2_9GAMM
Putative mobilization protein {ECO:0000313|EMBL:BAF92658.1}; TaxID=463 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Fluoribacter.;" source="Fluoribacter dumoffii.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_396_23
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

25687..26013
DNA (327bp) protein (109aa)
SCN18_25_1_16_R3_B_scaffold_396_24
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

25998..27845
DNA (1848bp) protein (616aa)
TraD n=5 Tax=Legionella pneumophila RepID=G8UVD9_LEGPN
Conjugal transfer protein TraD
Conjugal transfer protein TraD {ECO:0000313|EMBL:CEG58236.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
SCN18_25_1_16_R3_B_scaffold_396_25
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(28100..28852)
DNA (753bp) protein (251aa)
SCN18_25_1_16_R3_B_scaffold_396_26
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30413..31411
DNA (999bp) protein (333aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Cellvibrio sp. BR RepID=I3I5G0_9GAMM
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EIK43295.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
Putative ParA partition protein
SCN18_25_1_16_R3_B_scaffold_396_27
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31399..32562
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Vibrio tasmaniensis RepID=UPI0003061524
Uncharacterized protein {ECO:0000313|EMBL:EIK43296.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
parB-like partition protein
SCN18_25_1_16_R3_B_scaffold_396_28
unknown

Not on your lists

32568..32972
DNA (405bp) protein (135aa)

This feature has no annotations

SCN18_25_1_16_R3_B_scaffold_396_29
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33281..34213)
DNA (933bp) protein (311aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Sensor protein n=1 Tax=uncultured bacterium RepID=K1Z7S1_9BACT
integral membrane sensor signal transduction histidine kinase
Displaying 29 items

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