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SCN18_25_1_16_R5_B_scaffold_201

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R5_B_scaffold_201_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..698)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Holospora obtusa RepID=UPI0003AF03F2
UDP-glucuronic acid decarboxylase 6 {ECO:0000313|EMBL:ETZ07148.1}; TaxID=1399147 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
NAD-dependent epimerase/dehydratase
SCN18_25_1_16_R5_B_scaffold_201_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(915..2813)
DNA (1899bp) protein (633aa)
Asparagine synthetase {ECO:0000313|EMBL:KFC66805.1}; EC=6.3.5.4 {ECO:0000313|EMBL:KFC66805.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Asparagine synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S8W6_9RHIZ
asparagine synthase
SCN18_25_1_16_R5_B_scaffold_201_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2966..4798)
DNA (1833bp) protein (611aa)
Carbamoyltransferase {ECO:0000313|EMBL:KFC66757.1}; EC=2.1.3.- {ECO:0000313|EMBL:KFC66757.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Carbamoyltransferase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2X5_9PROT
conserved hypothetical protein; putative Carbamoyltransferase family protein
SCN18_25_1_16_R5_B_scaffold_201_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4810..4959)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L5P1_MAGSM
Uncharacterized protein {ECO:0000313|EMBL:KFC66756.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_201_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4973..5410)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIT8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC66755.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_201_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5589..6365)
DNA (777bp) protein (259aa)
3-oxoacyl-(Acyl-carrier protein) reductase {ECO:0000313|EMBL:KFC70055.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KFC70055.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
3-ketoacyl-ACP reductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031B2133
short-chain dehydrogenase/reductase SDR
SCN18_25_1_16_R5_B_scaffold_201_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6434..7201)
DNA (768bp) protein (256aa)
Transcriptional regulator, GntR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQA6_METNO
Transcriptional regulator {ECO:0000313|EMBL:KFC70056.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GntR family transcriptional regulator
SCN18_25_1_16_R5_B_scaffold_201_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7320..8576
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PM42_9BRAD
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:KFC70057.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular ligand-binding receptor
SCN18_25_1_16_R5_B_scaffold_201_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8756..9631
DNA (876bp) protein (292aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DFF314
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:KFC70058.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator
SCN18_25_1_16_R5_B_scaffold_201_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9639..12164
DNA (2526bp) protein (842aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F07164
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:KFC70059.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein
SCN18_25_1_16_R5_B_scaffold_201_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12376..13317
DNA (942bp) protein (314aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KFC70060.1}; EC=1.1.1.35 {ECO:0000313|EMBL:KFC70060.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U8S3_METS4
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
SCN18_25_1_16_R5_B_scaffold_201_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13352..14284
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQA1_METNO
Uncharacterized protein {ECO:0000313|EMBL:KFC70061.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_201_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14387..15664)
DNA (1278bp) protein (426aa)
Hrp-dependent type III effector protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A1L2_9BRAD
Hrp-dependent type III effector protein {ECO:0000313|EMBL:KFC63607.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Hrp-dependent type III effector protein
SCN18_25_1_16_R5_B_scaffold_201_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15671..16948)
DNA (1278bp) protein (426aa)
Uncharacterized ribulose bisphosphate carboxylase-like protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZGS2_9BRAD
Putative ribulose bisphosphate carboxylase-like protein {ECO:0000313|EMBL:KFC63608.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
uncharacterized ribulose bisphosphate carboxylase-like protein
SCN18_25_1_16_R5_B_scaffold_201_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17103..17642)
DNA (540bp) protein (180aa)
Glyoxalase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZFU6_9BRAD
Glyoxalase {ECO:0000313|EMBL:KFC63609.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glyoxalase
SCN18_25_1_16_R5_B_scaffold_201_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17673..19550)
DNA (1878bp) protein (626aa)
Tripartite ATP-independent periplasmic transporter n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZG02_9BRAD
Tripartite ATP-independent periplasmic transporter {ECO:0000313|EMBL:KFC63610.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
tripartite ATP-independent periplasmic transporter
SCN18_25_1_16_R5_B_scaffold_201_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19635..20651)
DNA (1017bp) protein (339aa)
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component (DctP-like) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUC1_AZOBR
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component, DctP-like protein {ECO:0000313|EMBL:KFC63611.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative TRAP-type C4-dicarboxylate transport system, periplasmic component, DctP-like protein
SCN18_25_1_16_R5_B_scaffold_201_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20765..21853
DNA (1089bp) protein (363aa)
Regulatory protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A1L5_9BRAD
Regulatory protein {ECO:0000313|EMBL:KFC63612.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
regulatory protein
SCN18_25_1_16_R5_B_scaffold_201_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21876..22889)
DNA (1014bp) protein (338aa)
Putative low-affinity phosphate transport protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q2L8_9RHIZ
Phosphate/sulfate permease {ECO:0000313|EMBL:KFC73892.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Phosphate transporter
SCN18_25_1_16_R5_B_scaffold_201_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22902..23546)
DNA (645bp) protein (215aa)
Phosphate transport regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB77_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:KFC73893.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphate transport regulator
SCN18_25_1_16_R5_B_scaffold_201_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23835..24125
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GXQ9_CUPNN
Uncharacterized protein {ECO:0000313|EMBL:EUC18434.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_201_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24230..25603
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D60435
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:KFC63450.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
family 1 extracellular solute-binding protein
SCN18_25_1_16_R5_B_scaffold_201_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25600..27543
DNA (1944bp) protein (648aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000311DE5D
integral membrane sensor signal transduction histidine kinase
SCN18_25_1_16_R5_B_scaffold_201_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27540..28892
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000304E6D5
Two-component response regulator {ECO:0000313|EMBL:KFC63452.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
two component sigma-54 specific Fis family transcriptional regulator
SCN18_25_1_16_R5_B_scaffold_201_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29099..30436
DNA (1338bp) protein (446aa)
ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FDFDB6
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:KFC63453.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
family 1 extracellular solute-binding protein
SCN18_25_1_16_R5_B_scaffold_201_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30591..32306
DNA (1716bp) protein (572aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D71F0E
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC63454.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transporters inner membrane component
SCN18_25_1_16_R5_B_scaffold_201_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32309..33406
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F5EE1C
ABC transporter related protein {ECO:0000313|EMBL:KFC63455.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter
SCN18_25_1_16_R5_B_scaffold_201_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33505..34563
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312B86B
Phosphonate ABC transporter periplasmic phosphonate-binding protein {ECO:0000313|EMBL:EMS39365.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
phosphonate ABC transporter periplasmic phosphonate-binding protein
SCN18_25_1_16_R5_B_scaffold_201_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34584..35372
DNA (789bp) protein (263aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000373B5B0
phosphonate ABC transporter ATPase
SCN18_25_1_16_R5_B_scaffold_201_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35369..36994
DNA (1626bp) protein (542aa)
Phosphonate ABC transporter permease n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WH33_9EURY
Phosphonate ABC transporter permease {ECO:0000313|EMBL:ELY48662.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
phosphonate ABC transporter inner membrane protein
Displaying items 1-30 of 58 in total

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