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SCN18_25_1_16_R5_B_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R5_B_scaffold_210_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1502
DNA (1500bp) protein (500aa)
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:KFC69022.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KFC69022.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030AA405
SCN18_25_1_16_R5_B_scaffold_210_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1504..3018
DNA (1515bp) protein (505aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED2363
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:KFC69021.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_1_16_R5_B_scaffold_210_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3030..4457
DNA (1428bp) protein (476aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NADH-quinone oxidoreductase subunit N n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=NUON_METNO
proton-translocating NADH-quinone oxidoreductase subunit N
SCN18_25_1_16_R5_B_scaffold_210_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4572..5345
DNA (774bp) protein (258aa)
Biotin--[acetyl-CoA-carboxylase] synthase BirA {ECO:0000313|EMBL:KFC69019.1}; EC=6.3.4.15 {ECO:0000313|EMBL:KFC69019.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
BirA, biotin-(Acetyl-CoA-carboxylase) ligase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0C2_9RHIZ
biotin--acetyl-CoA-carboxylase ligase
SCN18_25_1_16_R5_B_scaffold_210_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5578..7248
DNA (1671bp) protein (557aa)
Putative hydrolase of the metallo-beta-lactamase superfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0C3_9RHIZ
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:KFC69018.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
beta-lactamase domain-containing protein
SCN18_25_1_16_R5_B_scaffold_210_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7346..7750
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3A112
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KFC69017.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methylmalonyl-CoA epimerase
SCN18_25_1_16_R5_B_scaffold_210_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7754..8167
DNA (414bp) protein (138aa)
Putative aminoacrylate peracid reductase RutC {ECO:0000313|EMBL:KFC69016.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC69016.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Translation initiation inhibitor, YabJ n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIX5_9PROT
endoribonuclease L-PSP
SCN18_25_1_16_R5_B_scaffold_210_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8164..8394
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IP90_XANP2
MFS transporter, DHA1 family, tetracycline resistance protein {ECO:0000313|EMBL:KFC69015.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_210_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8824..9369
DNA (546bp) protein (182aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KFC69014.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KFC69014.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMX4_9RHIZ
cyclophilin type peptidyl-prolyl cis-trans isomerase
SCN18_25_1_16_R5_B_scaffold_210_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9377..10012
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003740EA7
Uncharacterized protein {ECO:0000313|EMBL:KFC69013.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_210_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10012..10479
DNA (468bp) protein (156aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KFC69012.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KFC69012.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030C5403
peptidyl-prolyl cis-trans isomerase
SCN18_25_1_16_R5_B_scaffold_210_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10507..11592
DNA (1086bp) protein (362aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMX7_9RHIZ
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
SCN18_25_1_16_R5_B_scaffold_210_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11713..12252)
DNA (540bp) protein (180aa)
Cytochrome c n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QPJ0_9BRAD
Cytochrome C {ECO:0000313|EMBL:KGT81208.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
cytochrome C
SCN18_25_1_16_R5_B_scaffold_210_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12239..13504)
DNA (1266bp) protein (422aa)
Twin-arginine translocation pathway signal n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z2G6_9BRAD
twin-arginine translocation pathway signal precursor
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:BAM87413.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCN18_25_1_16_R5_B_scaffold_210_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13934..14890
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035FF1A2
AraC family transcriptional regulator {ECO:0000313|EMBL:EIZ81509.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
AraC family transcriptional regulator
SCN18_25_1_16_R5_B_scaffold_210_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14909..16048)
DNA (1140bp) protein (380aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036C9914
ribonuclease D
SCN18_25_1_16_R5_B_scaffold_210_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16293..18077
DNA (1785bp) protein (595aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:KFC61638.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KFC61638.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=SYD_NITHX
SCN18_25_1_16_R5_B_scaffold_210_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18082..18453
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC61639.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_1_16_R5_B_scaffold_210_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18459..18764
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC61640.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_1_16_R5_B_scaffold_210_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18807..19697
DNA (891bp) protein (297aa)
Glycosyl transferase family 2 n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZFX5_METPB
Putative Glycosyl transferase, family 2 {ECO:0000313|EMBL:KFC61641.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
family 2 glycosyl transferase
SCN18_25_1_16_R5_B_scaffold_210_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19700..20758
DNA (1059bp) protein (353aa)
Putative acyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX03_9RHIZ
Putative acyltransferase {ECO:0000313|EMBL:EIM28495.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
acyltransferase 3
SCN18_25_1_16_R5_B_scaffold_210_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20730..21458)
DNA (729bp) protein (243aa)
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX04_9RHIZ
Hexapeptide repeat-containing transferase {ECO:0000313|EMBL:KFC61643.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Chloramphenicol acetyltransferase
SCN18_25_1_16_R5_B_scaffold_210_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21448..23298)
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUT6_METNO
Uncharacterized protein {ECO:0000313|EMBL:KFC61644.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_210_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23359..24072
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KT41_METC4
Uncharacterized protein {ECO:0000313|EMBL:KFC61645.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_210_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24089..24865)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375AB5E
Uncharacterized protein {ECO:0000313|EMBL:KGM32017.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
IclR family transcriptional regulator
SCN18_25_1_16_R5_B_scaffold_210_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25113..25907
DNA (795bp) protein (265aa)
ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000316A448
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:KFC75708.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amino acid ABC transporter substrate-binding protein
SCN18_25_1_16_R5_B_scaffold_210_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25945..27099
DNA (1155bp) protein (385aa)
Xaa-Pro aminopeptidase n=1 Tax=Schlesneria paludicola RepID=UPI00029B553E
Putative peptidase {ECO:0000313|EMBL:CEJ15020.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
creatinase
SCN18_25_1_16_R5_B_scaffold_210_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27187..27345)
DNA (159bp) protein (53aa)
SCN18_25_1_16_R5_B_scaffold_210_trna_1
unknown

Not on your lists

27666..27739
DNA (74bp)
transferRNA Pro
SCN18_25_1_16_R5_B_scaffold_210_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27788..28093
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030F4D7F
Uncharacterized protein {ECO:0000313|EMBL:KFC69087.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NADH dehydrogenase (ubiquinone) Fe-S protein 4
Displaying items 1-30 of 73 in total

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