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SCN18_25_1_16_R5_B_scaffold_241

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R5_B_scaffold_241_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1758)
DNA (1758bp) protein (586aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase 4 subunit B n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z000_9RHIZ
SCN18_25_1_16_R5_B_scaffold_241_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1876..2262
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC68907.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_1_16_R5_B_scaffold_241_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2319..3551
DNA (1233bp) protein (411aa)
Glycosyl transferase group 1 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U7J0_METS4
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACA16212.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_25_1_16_R5_B_scaffold_241_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3579..4526)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J6W5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11830.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
putative methyltransferase
SCN18_25_1_16_R5_B_scaffold_241_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4662..6029
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V714_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN86837.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
nitrous oxidase accessory protein
SCN18_25_1_16_R5_B_scaffold_241_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6131..7540)
DNA (1410bp) protein (470aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Glutamine synthetase n=5 Tax=Methylobacterium extorquens RepID=A9W5B6_METEP
glutamine synthetase
SCN18_25_1_16_R5_B_scaffold_241_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7636..7974)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QQ96_METTR
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KFC68903.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glnK; nitrogen regulatory protein P-II
SCN18_25_1_16_R5_B_scaffold_241_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8255..9772
DNA (1518bp) protein (506aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UD21_METS4
Uncharacterized protein {ECO:0000313|EMBL:KFC68902.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
carbohydrate kinase
SCN18_25_1_16_R5_B_scaffold_241_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9867..10406)
DNA (540bp) protein (180aa)
photosystem reaction center subunit H n=1 Tax=Afipia birgiae RepID=UPI0002F1F3AF
PRC-barrel domain protein {ECO:0000313|EMBL:KFC68901.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PRC-barrel domain-containing protein
SCN18_25_1_16_R5_B_scaffold_241_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10603..10875
DNA (273bp) protein (91aa)
SCN18_25_1_16_R5_B_scaffold_241_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10921..11724)
DNA (804bp) protein (268aa)
putative Beta-lactamase (EC:3.5.2.6)
Putative Beta-lactamase n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NDE1_RALSL
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:EFL50217.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
SCN18_25_1_16_R5_B_scaffold_241_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12392..12631
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJU7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW17029.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_241_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12894..13154
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAS1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EZQ15009.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_241_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13312..13518
DNA (207bp) protein (69aa)
SCN18_25_1_16_R5_B_scaffold_241_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13464..13613)
DNA (150bp) protein (50aa)
SCN18_25_1_16_R5_B_scaffold_241_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13731..14669)
DNA (939bp) protein (313aa)
hypothetical protein id=14627789 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
SCN18_25_1_16_R5_B_scaffold_241_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15384..16208)
DNA (825bp) protein (275aa)
Glutamine ABC transporter, periplasmic amino acid-binding protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PTQ5_9RHOO
glnH; glutamine ABC transporter, periplasmic amino acid-binding protein
Tax=GWA2_Burkholderiales_64_37_curated
SCN18_25_1_16_R5_B_scaffold_241_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16234..16953)
DNA (720bp) protein (240aa)
Amino acids ABC transporter, ATP-binding protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MG09_BORPB
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:CDG84322.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
SCN18_25_1_16_R5_B_scaffold_241_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16950..17681)
DNA (732bp) protein (244aa)
Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XWP2_ALCXX
Putative amino acid ABC transport, permease protein {ECO:0000313|EMBL:KFC64592.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4
SCN18_25_1_16_R5_B_scaffold_241_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17678..18361)
DNA (684bp) protein (228aa)
glutamate/aspartate ABC transporter permease GltJ n=1 Tax=Herbaspirillum seropedicae RepID=UPI00030791CB
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:KFC64591.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Glutamate Aspartate transport system permease protein GltJ
SCN18_25_1_16_R5_B_scaffold_241_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18486..18848)
DNA (363bp) protein (121aa)
Endoribonuclease L-PSP family protein n=3 Tax=Azotobacter vinelandii RepID=C1DJZ6_AZOVD
endoribonuclease L-PSP family protein
Endoribonuclease L-PSP family protein {ECO:0000313|EMBL:AGK22226.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;"
SCN18_25_1_16_R5_B_scaffold_241_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18873..20345)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0003058BE1
Uncharacterized protein {ECO:0000313|EMBL:EST18623.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
selenocysteine synthase-like protein
SCN18_25_1_16_R5_B_scaffold_241_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20371..21630)
DNA (1260bp) protein (420aa)
D-amino-acid dehydrogenase (EC:1.4.99.1)
D-amino-acid dehydrogenase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A085_STAND
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_25_1_16_R5_B_scaffold_241_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21870..22769)
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas mandelii RepID=UPI00035C393A
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC64587.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Transcriptional regulator, LysR family
SCN18_25_1_16_R5_B_scaffold_241_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23650..24903
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YQJ4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG67157.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
phage-like integrase
SCN18_25_1_16_R5_B_scaffold_241_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25328..25540
DNA (213bp) protein (71aa)
Phage transcriptional regulator, AlpA n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ERY6_METSB
Uncharacterized protein {ECO:0000313|EMBL:KFG67146.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
phage transcriptional regulator AlpA
SCN18_25_1_16_R5_B_scaffold_241_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25542..26489
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Sulfitobacter phage pCB2047-A RepID=M4QM11_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:KFC26813.1}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp. CB2047.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_241_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26486..26944
DNA (459bp) protein (153aa)
SCN18_25_1_16_R5_B_scaffold_241_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26959..27600
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000288EA29
SCN18_25_1_16_R5_B_scaffold_241_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27742..27993
DNA (252bp) protein (84aa)
Displaying items 1-30 of 62 in total

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