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SCN18_25_1_16_R5_B_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R5_B_scaffold_250_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1221)
DNA (1221bp) protein (407aa)
SCN18_25_1_16_R5_B_scaffold_250_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1386..3698)
DNA (2313bp) protein (771aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G653_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK75196.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_250_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3698..3985)
DNA (288bp) protein (96aa)
SCN18_25_1_16_R5_B_scaffold_250_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3985..4161)
DNA (177bp) protein (59aa)
SCN18_25_1_16_R5_B_scaffold_250_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4323..4829)
DNA (507bp) protein (169aa)
SCN18_25_1_16_R5_B_scaffold_250_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5127..5906
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Providencia burhodogranariea DSM 19968 RepID=K8W9G4_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHL94846.1}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B 3415.;"
SCN18_25_1_16_R5_B_scaffold_250_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5985..6173)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B9P1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIM66293.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
SCN18_25_1_16_R5_B_scaffold_250_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6367..6873)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4Z310_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL80536.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCN18_25_1_16_R5_B_scaffold_250_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6870..7112)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003601281
SCN18_25_1_16_R5_B_scaffold_250_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7219..7488)
DNA (270bp) protein (90aa)
Transcriptional regulator, XRE family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RI87_PHEZH
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACG80062.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_25_1_16_R5_B_scaffold_250_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7550..7930
DNA (381bp) protein (127aa)
SCN18_25_1_16_R5_B_scaffold_250_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7935..8201
DNA (267bp) protein (89aa)
SCN18_25_1_16_R5_B_scaffold_250_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8244..8627
DNA (384bp) protein (128aa)
SCN18_25_1_16_R5_B_scaffold_250_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8662..9192
DNA (531bp) protein (177aa)
SCN18_25_1_16_R5_B_scaffold_250_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9189..9362
DNA (174bp) protein (58aa)
SCN18_25_1_16_R5_B_scaffold_250_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9359..9730
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4Q6T4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ74953.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
SCN18_25_1_16_R5_B_scaffold_250_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9727..10020
DNA (294bp) protein (98aa)
SCN18_25_1_16_R5_B_scaffold_250_trna_1
unknown

Not on your lists

comp(10146..10218)
DNA (73bp)
transferRNA Ala
SCN18_25_1_16_R5_B_scaffold_250_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10392..10796)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEB9_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KFC70745.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_250_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11071..11754
DNA (684bp) protein (228aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Cytidylate kinase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=KCY_METS4
cytidylate kinase
SCN18_25_1_16_R5_B_scaffold_250_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11971..12783
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTY3_9RHIZ
Metal ion dependent adhesion motif-containing protein {ECO:0000313|EMBL:KFC70742.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_250_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12817..14013)
DNA (1197bp) protein (399aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZB8_9RHIZ
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:KFC70720.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Bcr/CflA subfamily drug resistance transporter
SCN18_25_1_16_R5_B_scaffold_250_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14226..15635)
DNA (1410bp) protein (470aa)
Na+/H+ antiporter NhaD-like permease n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSJ9_9RHIZ
Putative transporter {ECO:0000313|EMBL:KFC70738.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_250_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15859..16647
DNA (789bp) protein (263aa)
Glutamine amidotransferase class-II n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U7F1_METS4
Putative glutamine amidotransferase, class-II {ECO:0000313|EMBL:KFC70740.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutamine amidotransferase
SCN18_25_1_16_R5_B_scaffold_250_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16712..19222
DNA (2511bp) protein (837aa)
ATP-dependent helicase HrpB n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTY1_9RHIZ
ATP-dependent helicase {ECO:0000313|EMBL:KFC70741.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ATP-dependent helicase HrpB
SCN18_25_1_16_R5_B_scaffold_250_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19288..21450)
DNA (2163bp) protein (721aa)
Putative penicillin-binding protein pbpC/mrcB-like protein {ECO:0000313|EMBL:KFC70721.1}; EC=2.4.1.129 {ECO:0000313|EMBL:KFC70721.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Penicillin-binding protein, 1A family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZC0_9RHIZ
1A family penicillin-binding protein
SCN18_25_1_16_R5_B_scaffold_250_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21743..22138
DNA (396bp) protein (132aa)
DoxX family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RR04_9PROT
DoxX family protein {ECO:0000313|EMBL:EFH10264.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
integral membrane protein (rhomboid family)
SCN18_25_1_16_R5_B_scaffold_250_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22240..22560)
DNA (321bp) protein (107aa)
trx; thioredoxin (EC:1.8.1.8)
thioredoxin n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314F036
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_1_16_R5_B_scaffold_250_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22671..26147)
DNA (3477bp) protein (1159aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EEC4FD
addA; Double-strand break repair helicase AddA
SCN18_25_1_16_R5_B_scaffold_250_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26144..29248)
DNA (3105bp) protein (1035aa)
Double-strand break repair protein AddB n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPU8_METNO
Double-strand break repair protein AddB {ECO:0000313|EMBL:KFC70725.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
double-strand break repair protein AddB
Displaying items 1-30 of 51 in total

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