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SCN18_25_1_16_R5_B_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R5_B_scaffold_320_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..81)
DNA (81bp) protein (27aa)
SCN18_25_1_16_R5_B_scaffold_320_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156..1130)
DNA (975bp) protein (325aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1X5_ALIDB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM31575.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_320_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1186..2091)
DNA (906bp) protein (302aa)
ABC transporter permease n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00028949B1
ABC transporter permease {ECO:0000313|EMBL:KIZ51773.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
binding-protein-dependent transport system inner membrane protein
SCN18_25_1_16_R5_B_scaffold_320_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2100..2912)
DNA (813bp) protein (271aa)
sulfonate ABC transporter ATP-binding lipoprotein n=2 Tax=Pseudomonas fuscovaginae RepID=UPI000289F5A8
ABC transporter {ECO:0000313|EMBL:KEZ78675.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
ABC transporter
SCN18_25_1_16_R5_B_scaffold_320_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2929..3933)
DNA (1005bp) protein (335aa)
putative periplasmic substrate-binding transmembrane protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00028935E2
Uncharacterized protein {ECO:0000313|EMBL:KIZ51771.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
putative periplasmic substrate-binding transmembrane protein
SCN18_25_1_16_R5_B_scaffold_320_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4306..4698
DNA (393bp) protein (131aa)
SCN18_25_1_16_R5_B_scaffold_320_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4845..5642)
DNA (798bp) protein (266aa)
Putative metal-dependent hydrolase n=2 Tax=Methylobacterium extorquens RepID=C5AQE5_METEA
Metal-dependent hydrolase PhnP {ECO:0000313|EMBL:KFC68868.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
metal-dependent hydrolase
SCN18_25_1_16_R5_B_scaffold_320_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5660..6460)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F393EE
TatD-related deoxyribonuclease {ECO:0000313|EMBL:KFC68869.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hydrolase, TatD family
SCN18_25_1_16_R5_B_scaffold_320_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6460..8019)
DNA (1560bp) protein (520aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Methionine--tRNA ligase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0J6_9RHIZ
methionyl-tRNA synthetase
SCN18_25_1_16_R5_B_scaffold_320_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8043..9113)
DNA (1071bp) protein (357aa)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:KFC68871.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KFC68871.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031B6505
DNA-directed DNA polymerase
SCN18_25_1_16_R5_B_scaffold_320_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9110..9796)
DNA (687bp) protein (229aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dTMP kinase (EC:2.7.4.9)
thymidylate kinase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000374E4FD
SCN18_25_1_16_R5_B_scaffold_320_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9805..10998)
DNA (1194bp) protein (398aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KFC68873.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KFC68873.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0J9_9RHIZ
SCN18_25_1_16_R5_B_scaffold_320_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11065..12219)
DNA (1155bp) protein (385aa)
Rare lipoprotein A n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELC8_METSB
Rare lipoprotein A {ECO:0000313|EMBL:KFC68874.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rare lipoprotein A
SCN18_25_1_16_R5_B_scaffold_320_trna_1
unknown

Not on your lists

12629..12715
DNA (87bp)
transferRNA Ser
SCN18_25_1_16_R5_B_scaffold_320_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12999..13181
DNA (183bp) protein (61aa)
excisionase family DNA binding domain-containing protein
SCN18_25_1_16_R5_B_scaffold_320_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13178..13369
DNA (192bp) protein (64aa)
SCN18_25_1_16_R5_B_scaffold_320_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13671..14603
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NQQ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF40164.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_320_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14603..15184
DNA (582bp) protein (194aa)
SCN18_25_1_16_R5_B_scaffold_320_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15817..16335
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW78_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35761.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCN18_25_1_16_R5_B_scaffold_320_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16520..16729
DNA (210bp) protein (70aa)
SCN18_25_1_16_R5_B_scaffold_320_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16726..16854
DNA (129bp) protein (43aa)
SCN18_25_1_16_R5_B_scaffold_320_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17032..17427
DNA (396bp) protein (132aa)
SCN18_25_1_16_R5_B_scaffold_320_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17475..20099
DNA (2625bp) protein (875aa)
UPI0003CF818D related cluster n=1 Tax=unknown RepID=UPI0003CF818D
Uncharacterized protein {ECO:0000313|EMBL:ESW92912.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
phage-encoded membrane protein
SCN18_25_1_16_R5_B_scaffold_320_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20156..20587
DNA (432bp) protein (144aa)
SCN18_25_1_16_R5_B_scaffold_320_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20580..20816
DNA (237bp) protein (79aa)
SCN18_25_1_16_R5_B_scaffold_320_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21132..21317
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC69400.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_1_16_R5_B_scaffold_320_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21748..22524
DNA (777bp) protein (259aa)
Transglutaminase-like superfamily protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDC7_9CAUL
Transglutaminase {ECO:0000313|EMBL:KIZ41279.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
transglutaminase
SCN18_25_1_16_R5_B_scaffold_320_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22745..23290)
DNA (546bp) protein (182aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC65762.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_1_16_R5_B_scaffold_320_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23338..23592)
DNA (255bp) protein (85aa)
SCN18_25_1_16_R5_B_scaffold_320_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23756..24565)
DNA (810bp) protein (270aa)
catalase (EC:1.11.1.6)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
catalase n=1 Tax=alpha proteobacterium L41A RepID=UPI0003732807
Displaying items 1-30 of 47 in total

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