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SCN18_25_1_16_R5_B_scaffold_701

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R5_B_scaffold_701_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..75)
DNA (75bp) protein (25aa)
SCN18_25_1_16_R5_B_scaffold_701_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(155..1024)
DNA (870bp) protein (290aa)
UPI0003CFA34B related cluster n=1 Tax=unknown RepID=UPI0003CFA34B
Uncharacterized protein {ECO:0000313|EMBL:KFC73125.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC-type Mn2+/Zn2+ transport system, permease component
SCN18_25_1_16_R5_B_scaffold_701_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1021..1875)
DNA (855bp) protein (285aa)
UPI0003D060BA related cluster n=1 Tax=unknown RepID=UPI0003D060BA
ABC-3 protein {ECO:0000313|EMBL:KFC73126.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
yfeC; chelated iron transport system membrane protein YfeC
SCN18_25_1_16_R5_B_scaffold_701_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1872..2783)
DNA (912bp) protein (304aa)
UPI0003D02199 related cluster n=1 Tax=unknown RepID=UPI0003D02199
ABC transporter related protein {ECO:0000313|EMBL:KFC73127.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sitB; Mn+2/Fe+2 ABC transporter ATPase SitB
SCN18_25_1_16_R5_B_scaffold_701_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2780..3700)
DNA (921bp) protein (307aa)
UPI0003CFF808 related cluster n=1 Tax=unknown RepID=UPI0003CFF808
Periplasmic solute binding protein {ECO:0000313|EMBL:KFC73128.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
periplasmic solute-binding protein
SCN18_25_1_16_R5_B_scaffold_701_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3829..4281
DNA (453bp) protein (151aa)
FUR family manganese uptake regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQJ9_9RHIZ
FUR family manganese uptake regulator {ECO:0000313|EMBL:EIM71851.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
ferric uptake regulator family protein
SCN18_25_1_16_R5_B_scaffold_701_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4391..6343)
DNA (1953bp) protein (651aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acetyl-CoA synthetase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031345E1
acetyl-CoA synthetase
SCN18_25_1_16_R5_B_scaffold_701_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6608..7018)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMT6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73131.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_701_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7018..7350)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73132.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_1_16_R5_B_scaffold_701_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7380..8375)
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
glycerol-3-phosphate dehydrogenase n=1 Tax=Xanthobacteraceae RepID=UPI000381546A
SCN18_25_1_16_R5_B_scaffold_701_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8375..9418)
DNA (1044bp) protein (348aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
protein kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DAF2CE
SCN18_25_1_16_R5_B_scaffold_701_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9532..10536
DNA (1005bp) protein (335aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMT3_9RHIZ
SCN18_25_1_16_R5_B_scaffold_701_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10569..12584
DNA (2016bp) protein (672aa)
Uroporphyrinogen III synthase HEM4 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JQT6_9PROT
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:KFC73136.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
uroporphyrinogen III synthase HEM4
SCN18_25_1_16_R5_B_scaffold_701_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12595..14280
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA925A
HemY-like protein {ECO:0000313|EMBL:KFC73137.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HemY domain-containing protein
SCN18_25_1_16_R5_B_scaffold_701_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14446..15474
DNA (1029bp) protein (343aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Pseudouridine synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUE3_9RHIZ
rluD; pseudouridine synthase
SCN18_25_1_16_R5_B_scaffold_701_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15681..16577
DNA (897bp) protein (299aa)
RNA polymerase sigma factor RpoH n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPM7_METNO
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RNA polymerase factor sigma-32
SCN18_25_1_16_R5_B_scaffold_701_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16571..16762)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73140.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying 17 items

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