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SCN18_25_1_16_R5_B_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 461 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R5_B_scaffold_16_1
unknown

Not on your lists

2..103
DNA (102bp) protein (34aa)

This feature has no annotations

SCN18_25_1_16_R5_B_scaffold_16_2
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(113..1630)
DNA (1518bp) protein (506aa)
ATP-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4FB4F
AAA-like domain protein {ECO:0000313|EMBL:KJL39036.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_3
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1627..2082)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0002F96291
Uncharacterized protein {ECO:0000313|EMBL:KJL39037.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_4
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2131..3597)
DNA (1467bp) protein (489aa)
membrane protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B33406
Uncharacterized protein {ECO:0000313|EMBL:KJL39038.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_5
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3601..4917)
DNA (1317bp) protein (439aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4AD1F
Uncharacterized protein {ECO:0000313|EMBL:KJL39039.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_6
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4948..5217)
DNA (270bp) protein (90aa)
membrane protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6388E
Uncharacterized protein {ECO:0000313|EMBL:KJL39040.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_7
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5506..5772)
DNA (267bp) protein (89aa)
membrane protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3E10C
Uncharacterized protein {ECO:0000313|EMBL:KJL39041.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_8
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5783..6946)
DNA (1164bp) protein (388aa)
Murein DD-endopeptidase MepM {ECO:0000313|EMBL:KJL29680.1}; EC=3.4.24.- {ECO:0000313|EMBL:KJL29680.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
peptidase M23 (EC:3.4.-.-)
Putative secreted M23 family peptidase n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VSL5_ARTAR
SCN18_25_1_16_R5_B_scaffold_16_9
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6959..7639)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPU7_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK36778.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCN18_25_1_16_R5_B_scaffold_16_10
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7639..8634)
DNA (996bp) protein (332aa)
chromosome partitioning protein ParB n=1 Tax=Glaciibacter superstes RepID=UPI0003B6D141
ParB-like nuclease
ParB-like nuclease {ECO:0000313|EMBL:ACS29596.1}; TaxID=465515 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC; 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) (Micrococcus; lysodeikticus).;"
SCN18_25_1_16_R5_B_scaffold_16_11
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8618..9529)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003808A23
Uncharacterized protein {ECO:0000313|EMBL:EYT55047.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_12
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9537..9947)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B51216
Uncharacterized protein {ECO:0000313|EMBL:KJL29684.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_13
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9944..10588)
DNA (645bp) protein (215aa)
excisionase n=1 Tax=Glaciibacter superstes RepID=UPI0003B68A71
Uncharacterized protein {ECO:0000313|EMBL:KJL29685.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_14
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10585..11481)
DNA (897bp) protein (299aa)
DNA primase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5047F
Bifunctional DNA primase/polymerase {ECO:0000313|EMBL:ETT25796.1}; Flags: Precursor;; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
bifunctional primase/DNA polymerase protein
SCN18_25_1_16_R5_B_scaffold_16_15
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11481..12563)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B355BA
Uncharacterized protein {ECO:0000313|EMBL:CDJ99389.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_16
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12721..13698)
DNA (978bp) protein (326aa)
Putative AraC family transcriptional regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPV4_MICPN
AraC family transcriptional regulator
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:BAK36785.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCN18_25_1_16_R5_B_scaffold_16_17
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14457..15002
DNA (546bp) protein (182aa)
SCN18_25_1_16_R5_B_scaffold_16_18
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14999..15580
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B6EC11
Uncharacterized protein {ECO:0000313|EMBL:GAC69410.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
SCN18_25_1_16_R5_B_scaffold_16_19
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

15588..16601
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B55915
Uncharacterized protein {ECO:0000313|EMBL:GAC69411.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_20
unknown

Not on your lists

16680..17135
DNA (456bp) protein (152aa)

This feature has no annotations

SCN18_25_1_16_R5_B_scaffold_16_21
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17138..17611
DNA (474bp) protein (158aa)
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17659..18153
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L1W5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH17812.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_23
SCNpilot_P_inoc_Xanthomonadales_63_13, SCNpilot_P_inoc_Xanthomonadales_63_13, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18153..19499
DNA (1347bp) protein (449aa)
Putative UBA/ThiF-type NAD/FAD binding fold containing protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L1W4_9ACTO
Putative UBA/ThiF-type NAD/FAD binding fold containing protein {ECO:0000313|EMBL:CCH17811.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
UBA/ThiF-type NAD/FAD binding fold containing protein
SCN18_25_1_16_R5_B_scaffold_16_24
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

20151..23693
DNA (3543bp) protein (1181aa)
TrwC relaxase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E306_9MICO
Conjugal transfer protein {ECO:0000313|EMBL:EXJ52921.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
conjugative relaxase domain protein, TrwC/TraI family
SCN18_25_1_16_R5_B_scaffold_16_25
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

23842..24228
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Dietzia alimentaria RepID=UPI00029AE8D1
Sulfate permease {ECO:0000313|EMBL:EXJ52923.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_26
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24341..25390)
DNA (1050bp) protein (350aa)
UPI0003D922AA related cluster n=1 Tax=unknown RepID=UPI0003D922AA
Uncharacterized protein {ECO:0000313|EMBL:KIZ20083.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
hypothetical protein
SCN18_25_1_16_R5_B_scaffold_16_27
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25387..25869)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036DE327
Uncharacterized protein {ECO:0000313|EMBL:EYT58582.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCN18_25_1_16_R5_B_scaffold_16_28
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26263..26520
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5L8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07764.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCN18_25_1_16_R5_B_scaffold_16_29
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26526..27677
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B31781
Uncharacterized protein {ECO:0000313|EMBL:CDK01642.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCN18_25_1_16_R5_B_scaffold_16_30
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27771..28097
DNA (327bp) protein (109aa)
amino acid permease n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289508B
Amino acid transporter {ECO:0000313|EMBL:EAR24069.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
amino acid permease
Displaying items 1-30 of 461 in total

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