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SCN18_25_8_15_R1_B_scaffold_1193

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R1_B_scaffold_1193_1
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1..483
DNA (483bp) protein (161aa)
Elongation factor Tu n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSL4_GRAMM
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCN18_25_8_15_R1_B_scaffold_1193_2
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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645..794
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X1R7_ACISM
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCN18_25_8_15_R1_B_scaffold_1193_trna_1
unknown

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863..935
DNA (73bp)
transferRNA Trp
SCN18_25_8_15_R1_B_scaffold_1193_3
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1005..1265
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036EA44B
Preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCN18_25_8_15_R1_B_scaffold_1193_4
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1313..1972
DNA (660bp) protein (220aa)
transcription antitermination protein NusG n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000376E7F7
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCN18_25_8_15_R1_B_scaffold_1193_5
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


2074..2508
DNA (435bp) protein (145aa)
50S ribosomal protein L11 n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036AB299
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCN18_25_8_15_R1_B_scaffold_1193_6
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2626..3681)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003648D7F
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ADW67990.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCN18_25_8_15_R1_B_scaffold_1193_7
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3772..5274)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E2171
Uncharacterized protein {ECO:0000313|EMBL:CBH99993.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_25_8_15_R1_B_scaffold_1193_8
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5421..6437
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00038111AD
Uncharacterized protein {ECO:0000313|EMBL:CBH99992.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_25_8_15_R1_B_scaffold_1193_9
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6461..8812)
DNA (2352bp) protein (784aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037100C7
ATP-dependent DNA helicase RecG
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ADW67794.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCN18_25_8_15_R1_B_scaffold_1193_10
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8915..9817
DNA (903bp) protein (301aa)
ABC transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6F9A4
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADV83372.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCN18_25_8_15_R1_B_scaffold_1193_11
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9810..11048
DNA (1239bp) protein (413aa)
transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5C39D
Na+ efflux pump ABC transporter permease
ABC-type Na+ efflux pump, permease component {ECO:0000313|EMBL:AFL86547.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCN18_25_8_15_R1_B_scaffold_1193_12
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11157..11405)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=K4I159_SPHSA
Uncharacterized protein {ECO:0000313|EMBL:EPR18479.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
hypothetical protein
SCN18_25_8_15_R1_B_scaffold_1193_13
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11402..11824)
DNA (423bp) protein (141aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=T0HZU5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEQ51701.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
SCN18_25_8_15_R1_B_scaffold_1193_14
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11911..12537
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000368037A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV82095.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCN18_25_8_15_R1_B_scaffold_1193_15
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12630..13733
DNA (1104bp) protein (368aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7AD5C
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
SCN18_25_8_15_R1_B_scaffold_1193_16
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13775..14680
DNA (906bp) protein (302aa)
DNA polymerase I n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X0D7_ACISM
DNA polymerase I
DNA polymerase I {ECO:0000313|EMBL:ADW67801.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
Displaying 17 items

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