ggKbase home page

SCN18_25_8_15_R1_B_scaffold_3095

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R1_B_scaffold_3095_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1..690)
DNA (690bp) protein (230aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
methionine aminopeptidase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003778956
methionine aminopeptidase
SCN18_25_8_15_R1_B_scaffold_3095_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

797..1300
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003811AEB
Uncharacterized protein {ECO:0000313|EMBL:KJL35319.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily
SCN18_25_8_15_R1_B_scaffold_3095_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


1474..1821
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=2 Tax=Microbacterium RepID=H8E4F8_9MICO
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rplS; ribosomal protein L19
SCN18_25_8_15_R1_B_scaffold_3095_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

1943..2719
DNA (777bp) protein (259aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031AAF6B
signal peptidase I
SCN18_25_8_15_R1_B_scaffold_3095_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

2716..3375
DNA (660bp) protein (220aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ribonuclease HII n=1 Tax=Microbacterium yannicii RepID=UPI0002EFCA72
ribonuclease HII
SCN18_25_8_15_R1_B_scaffold_3095_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3433..3756
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002ECD2BF
CTP synthase {ECO:0000313|EMBL:EZP29862.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
SCN18_25_8_15_R1_B_scaffold_3095_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3869..4231
DNA (363bp) protein (121aa)
UPF0102 protein MTES_3268 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDG6_MICTS
UPF0102 protein LK09_12230 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
endonuclease distantly
SCN18_25_8_15_R1_B_scaffold_3095_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

4228..5064
DNA (837bp) protein (279aa)
Predicted ATPase with chaperone activity n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDG7_MICTS
Mg chelatase-like protein {ECO:0000313|EMBL:KHK97507.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ATPase with chaperone activity
Displaying 8 items

View Taxonomy