ggKbase home page

SCN18_25_8_15_R2_B_scaffold_8524

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_8524_1
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..584)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037C57F3
Multiple sugar-binding protein {ECO:0000313|EMBL:KJL29928.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
family 1 extracellular solute-binding protein
SCN18_25_8_15_R2_B_scaffold_8524_2
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

742..1461
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036F6FC5
Putative Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCH76048.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
GntR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_8524_3
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2112..3209
DNA (1098bp) protein (366aa)
DNA-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XPV4_9MICO
DNA-binding protein {ECO:0000313|EMBL:GAD35080.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
DNA-binding HTH domain-containing proteins
SCN18_25_8_15_R2_B_scaffold_8524_4
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3203..4135)
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 849 str. F0330 RepID=G9PLH9_9ACTO
Leucobacter komagatae strain VKM ST2845 L_komagatae_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51677.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
sortase
SCN18_25_8_15_R2_B_scaffold_8524_5
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4300..5493)
DNA (1194bp) protein (398aa)
Putative fimbrial structural subunit n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VSA4_ARTAR
Leucobacter komagatae strain VKM ST2845 L_komagatae_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51773.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
fimA; fimbrial structural subunit
SCN18_25_8_15_R2_B_scaffold_8524_6
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5466..5786)
DNA (321bp) protein (107aa)
Leucobacter komagatae strain VKM ST2845 L_komagatae_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51773.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
SCN18_25_8_15_R2_B_scaffold_8524_7
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5842..7578)
DNA (1737bp) protein (579aa)
Leucobacter komagatae strain VKM ST2845 L_komagatae_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51757.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
Displaying 7 items

View Taxonomy