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SCN18_25_8_15_R2_B_scaffold_3089

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3089_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..111)
DNA (111bp) protein (37aa)
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3089_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(108..422)
DNA (315bp) protein (105aa)
Lycopene cyclase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VGT5_9MICO
Lycopene cyclase {ECO:0000313|EMBL:GAB95393.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
crtYd; lycopene cyclase
SCN18_25_8_15_R2_B_scaffold_3089_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(415..825)
DNA (411bp) protein (137aa)
Lycopene cyclase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XSB9_MICPN
crtYc; lycopene cyclase
Lycopene cyclase {ECO:0000313|EMBL:BAK34800.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCN18_25_8_15_R2_B_scaffold_3089_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

942..2171
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000366807E
cytochrome P450
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_25_8_15_R2_B_scaffold_3089_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2168..3499
DNA (1332bp) protein (444aa)
deoxyribodipyrimidine photo-lyase n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A9EC
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:EXJ51362.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
deoxyribodipyrimidine photolyase
SCN18_25_8_15_R2_B_scaffold_3089_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3538..4965)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036668E0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK35339.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCN18_25_8_15_R2_B_scaffold_3089_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4967..5689)
DNA (723bp) protein (241aa)
Abortive infection protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SFH0_INTC7
Abortive infection protein {ECO:0000313|EMBL:KGN36263.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3089_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5814..6347
DNA (534bp) protein (178aa)
ATP-binding protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000382A671
hypothetical protein
ATP/GTP binding protein {ECO:0000313|EMBL:EFL37424.1}; TaxID=467200 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
SCN18_25_8_15_R2_B_scaffold_3089_trna_1
unknown

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6469..6541
DNA (73bp)
transferRNA Ala
SCN18_25_8_15_R2_B_scaffold_3089_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6908..7849)
DNA (942bp) protein (314aa)
SCN18_25_8_15_R2_B_scaffold_3089_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7983..8630)
DNA (648bp) protein (216aa)
Phosphoglycerate mutase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3Y1_BEUC1
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ACQ79894.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCN18_25_8_15_R2_B_scaffold_3089_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8639..9025)
DNA (387bp) protein (129aa)
Ribosomal silencing factor RsfS n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BDN0_SANKS
iojap-like protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCN18_25_8_15_R2_B_scaffold_3089_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9052..10122)
DNA (1071bp) protein (357aa)
Antifreeze glycoprotein H1C1A1 (Fragment) n=1 Tax=Boreogadus saida RepID=J7HUK4_BORSA
Antifreeze glycoprotein H1C1A1 {ECO:0000313|EMBL:AFQ20100.1}; Flags: Fragment;; TaxID=44932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Boreogadus.;" source="Boreogadus saida (Polar cod).;"
translation initiation factor 2 (bIF-2)
SCN18_25_8_15_R2_B_scaffold_3089_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10119..10700)
DNA (582bp) protein (194aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3X7_BEUC1
SCN18_25_8_15_R2_B_scaffold_3089_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10753..10908)
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3X6_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ79889.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying 15 items

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