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SCN18_25_8_15_R2_B_scaffold_3132

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3132_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3..170
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QRZ5_ARTGO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB15481.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
phage shock protein A (IM30), suppresses sigma54-dependent transcription
SCN18_25_8_15_R2_B_scaffold_3132_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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437..1003
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZD0_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ79102.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCN18_25_8_15_R2_B_scaffold_3132_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1353..2093
DNA (741bp) protein (247aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZC9_BEUC1
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACQ79101.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCN18_25_8_15_R2_B_scaffold_3132_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2090..3673
DNA (1584bp) protein (528aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Histidine kinase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZC8_BEUC1
SCN18_25_8_15_R2_B_scaffold_3132_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3796..4875
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZC7_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ79099.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCN18_25_8_15_R2_B_scaffold_3132_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4933..5226
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZC6_BEUC1
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCN18_25_8_15_R2_B_scaffold_3132_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5601..5939)
DNA (339bp) protein (113aa)
SCN18_25_8_15_R2_B_scaffold_3132_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6176..7519
DNA (1344bp) protein (448aa)
Glycosyl hydrolase family 32 domain protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C559_STRBB
glycosyl transferase family protein
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:ADI08285.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
SCN18_25_8_15_R2_B_scaffold_3132_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7516..8109
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7L5J5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC56214.1}; TaxID=1121927 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
NUDIX hydrolase
SCN18_25_8_15_R2_B_scaffold_3132_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8121..9038
DNA (918bp) protein (306aa)
Uncharacterized conserved protein n=1 Tax=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) RepID=C5C900_MICLC
Uncharacterized protein {ECO:0000313|EMBL:EZP56179.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3132_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9127..9789
DNA (663bp) protein (221aa)
SCN18_25_8_15_R2_B_scaffold_3132_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9786..9959
DNA (174bp) protein (58aa)
Displaying 12 items

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