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SCN18_25_8_15_R2_B_scaffold_793

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_793_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97..1062)
DNA (966bp) protein (322aa)
Patatin n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB10_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB84093.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
patatin
SCN18_25_8_15_R2_B_scaffold_793_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1115..2395)
DNA (1281bp) protein (427aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB11_PELHB
phosphoribosylamine--glycine ligase
SCN18_25_8_15_R2_B_scaffold_793_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2775..4760
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV17_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78075.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
tetratricopeptide repeat-containing protein
SCN18_25_8_15_R2_B_scaffold_793_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4973..6385
DNA (1413bp) protein (471aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB12_PELHB
exodeoxyribonuclease VII large subunit
SCN18_25_8_15_R2_B_scaffold_793_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6633..6863
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB13_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10481.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_793_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6853..8352)
DNA (1500bp) protein (500aa)
PMT family glycosyltransferase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IIL6_9FIRM
Glycosyl/arabinosyl/mannosyl transferase {ECO:0000313|EMBL:GAN78034.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical membrane protein
SCN18_25_8_15_R2_B_scaffold_793_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8376..9104)
DNA (729bp) protein (243aa)
Putative Membrane-anchored protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EX34_9RHIZ
Membrane-anchored protein {ECO:0000313|EMBL:CDX32307.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
membrane-anchored protein
SCN18_25_8_15_R2_B_scaffold_793_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9124..9651)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000371F03A
type 11 methyltransferase
SCN18_25_8_15_R2_B_scaffold_793_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9743..10516)
DNA (774bp) protein (258aa)
Putative glycosyltransferase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SFE0_9RHOB
Putative glycosyltransferase {ECO:0000313|EMBL:EPX84994.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
glycosyltransferase
SCN18_25_8_15_R2_B_scaffold_793_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10513..11616)
DNA (1104bp) protein (368aa)
Polysaccharide synthesis/modification protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JV99_9RHOB
Polysaccharide synthesis/modification protein {ECO:0000313|EMBL:BAQ71062.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophilum (Rhodobacter sulfidophilus).;"
polysaccharide synthesis/modification protein
SCN18_25_8_15_R2_B_scaffold_793_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11746..12561
DNA (816bp) protein (272aa)
SCN18_25_8_15_R2_B_scaffold_793_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12610..13446)
DNA (837bp) protein (279aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0G3_9RHIZ
SCN18_25_8_15_R2_B_scaffold_793_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13446..14051)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003645E60
Phosphoglycerate mutase {ECO:0000313|EMBL:ETI65622.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
phosphoglycerate mutase
SCN18_25_8_15_R2_B_scaffold_793_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14048..14866)
DNA (819bp) protein (273aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|SAAS:SAAS00089008};; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAB91
3-deoxy-manno-octulosonate cytidylyltransferase
SCN18_25_8_15_R2_B_scaffold_793_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14866..15891)
DNA (1026bp) protein (342aa)
KpsF/GutQ family protein (EC:5.3.1.13)
KpsF/GutQ family protein {ECO:0000313|EMBL:ABI66783.1}; EC=5.3.1.13 {ECO:0000313|EMBL:ABI66783.1};; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
KpsF/GutQ n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039AADAB
SCN18_25_8_15_R2_B_scaffold_793_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16142..17383
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALgr3 RepID=UPI0003804C82
3-deoxy-D-manno-octulosonic-acid transferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCN18_25_8_15_R2_B_scaffold_793_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17451..17705)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bradyrhizobium RepID=A4Z0S4_BRASO
Uncharacterized protein, Bsl7517 homolog {ECO:0000313|EMBL:CDP52811.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_793_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17709..18548)
DNA (840bp) protein (280aa)
Inositol monophosphatase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB15_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB84100.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
inositol monophosphatase
SCN18_25_8_15_R2_B_scaffold_793_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18837..19367
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB16_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB84101.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_793_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19545..20477)
DNA (933bp) protein (311aa)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB17_PELHB
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:KKB10475.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
4-hydroxybenzoate polyprenyltransferase
SCN18_25_8_15_R2_B_scaffold_793_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20535..21284
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB18_PELHB
ribosomal RNA small subunit methyltransferase E
SCN18_25_8_15_R2_B_scaffold_793_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21366..22730
DNA (1365bp) protein (455aa)
Glutamate--cysteine ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB19_PELHB
Glutamate--cysteine ligase {ECO:0000313|EMBL:KFL27664.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
glutamate--cysteine ligase
SCN18_25_8_15_R2_B_scaffold_793_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22954..23841)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB23_PELHB
FIG049039: Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDP52401.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_793_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23992..24264
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB11149.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCN18_25_8_15_R2_B_scaffold_793_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24466..24966)
DNA (501bp) protein (167aa)
Signal recognition particle GTPase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB25_PELHB
Signal recognition particle GTPase {ECO:0000313|EMBL:KFC67304.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
signal recognition particle GTPase
SCN18_25_8_15_R2_B_scaffold_793_26
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25326..26240
DNA (915bp) protein (305aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Cytochrome c oxidase subunit 2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB26_PELHB
cytochrome c oxidase polypeptide II
SCN18_25_8_15_R2_B_scaffold_793_27
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26303..27997
DNA (1695bp) protein (565aa)
Cytochrome c oxidase, subunit I n=20 Tax=Brucella RepID=C0G4K9_9RHIZ
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:KFL27660.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
cytochrome c oxidase subunit I
SCN18_25_8_15_R2_B_scaffold_793_28
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28057..28986
DNA (930bp) protein (310aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Protoheme IX farnesyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB28_PELHB
heme O synthase, protoheme IX farnesyltransferase COX10-CtaB
SCN18_25_8_15_R2_B_scaffold_793_29
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28977..29150
DNA (174bp) protein (58aa)
CoxF protein (EC:1.9.3.1)
Putative CoxF {ECO:0000313|EMBL:ACS41208.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACS41208.1};; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
Putative CoxF n=2 Tax=Methylobacterium extorquens RepID=C5AYA9_METEA
SCN18_25_8_15_R2_B_scaffold_793_30
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29150..29713
DNA (564bp) protein (188aa)
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB30_PELHB
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Displaying items 1-30 of 39 in total

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