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SCN18_25_8_15_R2_B_scaffold_853

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_853_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..624)
DNA (624bp) protein (208aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RTQ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKB78143.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ABC transporter
SCN18_25_8_15_R2_B_scaffold_853_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

954..3566
DNA (2613bp) protein (871aa)
ABC transporter, permease protein, putative n=1 Tax=Rhodovulum sp. PH10 RepID=J5PQT1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB78003.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_853_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3888..6599
DNA (2712bp) protein (904aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDE1_GEOOG
LuxR family MalT-like ATP-dependent transcriptional regulator
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:ADB74394.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCN18_25_8_15_R2_B_scaffold_853_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6770..7033
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEZ3_GEOOG
Uncharacterized protein {ECO:0000313|EMBL:ETP69873.1}; TaxID=1273538 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium glaciei CHR43.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_853_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7058..7849
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003621763
Uncharacterized protein {ECO:0000313|EMBL:CEA09414.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_853_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7856..7969
DNA (114bp) protein (38aa)
SCN18_25_8_15_R2_B_scaffold_853_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8120..9907)
DNA (1788bp) protein (596aa)
Uncharacterized protein {ECO:0000313|EMBL:CQD06351.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
id=1797830 bin=GWE2_Gammaproteobacteria_37_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
SCN18_25_8_15_R2_B_scaffold_853_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9908..13108)
DNA (3201bp) protein (1067aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFT2_9GAMM
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48657.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_853_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13486..14199
DNA (714bp) protein (238aa)
SCN18_25_8_15_R2_B_scaffold_853_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14274..15377)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003779C79
Putative amino acid aldolase or racemase {ECO:0000313|EMBL:AKH98824.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
alanine racemase
SCN18_25_8_15_R2_B_scaffold_853_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15395..16366)
DNA (972bp) protein (324aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZT3_RHOFD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCN18_25_8_15_R2_B_scaffold_853_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16382..17185)
DNA (804bp) protein (268aa)
3-ketoacyl-ACP reductase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B53902
3-beta hydroxysteroid dehydrogenase/isomerase family protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_25_8_15_R2_B_scaffold_853_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17435..18313
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZYE9_9BACT
NAD-dependent epimerase/dehydratase
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_25_8_15_R2_B_scaffold_853_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18578..19786
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AGJ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD60826.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sugar ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_853_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19903..20784
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AGF3_9BACT
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_25_8_15_R2_B_scaffold_853_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20771..21598
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AWJ1_9BACT
ABC-type sugar transport system, permease component
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_25_8_15_R2_B_scaffold_853_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21725..22864)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 1116 RepID=B8R902_9BACT
alanine racemase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_25_8_15_R2_B_scaffold_853_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22898..24427)
DNA (1530bp) protein (510aa)
MlrC family protein 3 n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QSH2_RALPI
MlrC family protein 3
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_25_8_15_R2_B_scaffold_853_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24524..25438)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BEY9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD60654.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_853_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25665..27107
DNA (1443bp) protein (481aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZS3_RHOFD
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_25_8_15_R2_B_scaffold_853_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27129..27893
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QWP8_CHRSD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE59110.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
SCN18_25_8_15_R2_B_scaffold_853_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28090..29172)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M072_METRJ
Uncharacterized protein {ECO:0000313|EMBL:KKN80721.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_853_trna_1
unknown

Not on your lists

comp(29358..29430)
DNA (73bp)
transferRNA Ala
SCN18_25_8_15_R2_B_scaffold_853_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29592..30605)
DNA (1014bp) protein (338aa)
deoxyfructose oxidoreductase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B31E9C
NAD-binding protein {ECO:0000313|EMBL:KKB08871.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
oxidoreductase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_853_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30709..31902)
DNA (1194bp) protein (398aa)
HI0933 family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJM0_CAUST
Membrane protein {ECO:0000313|EMBL:KKC35168.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_853_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32124..32228
DNA (105bp) protein (35aa)
SCN18_25_8_15_R2_B_scaffold_853_26
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32333..33373
DNA (1041bp) protein (347aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6E2_PELHB
aspartate-semialdehyde dehydrogenase
SCN18_25_8_15_R2_B_scaffold_853_27
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33569..34444
DNA (876bp) protein (292aa)
EamA-like transporter family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYV0_9RHIZ
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:CDP52294.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
EamA-like transporter family protein
SCN18_25_8_15_R2_B_scaffold_853_28
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34441..34893
DNA (453bp) protein (151aa)
Acetyltransferase, gnat family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6N6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJF68787.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_853_29
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35051..35689)
DNA (639bp) protein (213aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
carbonate dehydratase n=1 Tax=Rhizobium loti RepID=UPI00035C7ECA
cah; carbonate dehydratase
Displaying items 1-30 of 37 in total

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