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SCN18_25_8_15_R2_B_scaffold_5705

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_5705_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..241)
DNA (240bp) protein (80aa)
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
dihydroxy-acid dehydratase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034927FE
SCN18_25_8_15_R2_B_scaffold_5705_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(664..3219)
DNA (2556bp) protein (852aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
valS; valine tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Caulobacter crescentus OR37 RepID=R0E7S8_CAUCE
SCN18_25_8_15_R2_B_scaffold_5705_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3941..4630)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAF9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFC69973.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_5705_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4808..5185)
DNA (378bp) protein (126aa)
signal peptide protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558621
Contig2, whole genome shotgun sequence {ECO:0000313|EMBL:ETA50235.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
Hypothetical protein
SCN18_25_8_15_R2_B_scaffold_5705_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5311..6687)
DNA (1377bp) protein (459aa)
Type I secretion outer membrane protein, TolC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAG0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP53611.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
type I secretion outer membrane protein, TolC
SCN18_25_8_15_R2_B_scaffold_5705_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6842..7495)
DNA (654bp) protein (218aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:CDP53610.1}; EC=2.1.1.77 {ECO:0000313|EMBL:CDP53610.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAG1_PELHB
protein-L-isoaspartate O-methyltransferase
SCN18_25_8_15_R2_B_scaffold_5705_7
unknown

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7567..7824
DNA (258bp) protein (86aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_5705_trna_1
unknown

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comp(7772..7842)
DNA (71bp)
transferRNA Cys
SCN18_25_8_15_R2_B_scaffold_5705_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8000..8527
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035FCD52
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH80379.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
Displaying 9 items

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