ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3348

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3348_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364CA32
Amino acid ABC transporter {ECO:0000313|EMBL:KFL27219.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
amino acid ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_3348_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296..1093)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003820D75
Amino acid ABC transporter {ECO:0000313|EMBL:KFL32325.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_3348_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1307..1618)
DNA (312bp) protein (104aa)
Selenoprotein W-related protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T7L0_ALCXX
SelT/selW/selH selenoprotein domain protein {ECO:0000313|EMBL:KFC64341.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3348_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1615..2043)
DNA (429bp) protein (143aa)
Putative cyclic nucleotide binding protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6D5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFL25782.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3348_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2243..3268)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JJ90_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:KFL24871.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3348_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3329..4324
DNA (996bp) protein (332aa)
UPF0176 protein KKY_3710 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ1_PELHB
UPF0176 protein WH91_17060 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
rhodanese domain-containing protein
SCN18_25_8_15_R2_B_scaffold_3348_7
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4494..5000
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA64_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB77871.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3348_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4997..5803)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003721F1D
Uncharacterized protein {ECO:0000313|EMBL:CDP53299.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
response regulator, LytR/AlgR family
SCN18_25_8_15_R2_B_scaffold_3348_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5917..6405
DNA (489bp) protein (163aa)
Tat pathway signal sequence n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S172_9RALS
Probable transmembrane protein {ECO:0000313|EMBL:CDP53300.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
tat pathway signal sequence
SCN18_25_8_15_R2_B_scaffold_3348_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6493..8136
DNA (1644bp) protein (548aa)
Putative glucose-methanol-choline oxidoreductase protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AHH2_RHIET
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:KEC71646.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
glucose-methanol-choline oxidoreductase
SCN18_25_8_15_R2_B_scaffold_3348_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8284..8922
DNA (639bp) protein (213aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2B3V9_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJJ30665.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
FMN-binding negative transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3348_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8986..9120
DNA (135bp) protein (45aa)
Displaying 12 items

View Taxonomy