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SCN18_25_8_15_R2_B_scaffold_1073

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1073_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..965
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F872BD
Glycerol 3-phosphate ABC transporter {ECO:0000313|EMBL:KKB76482.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ugpB-1; sn-glycerol 3-phosphate ABC transporter substrate-binding protein UgpB 1
SCN18_25_8_15_R2_B_scaffold_1073_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1039..1923
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EFD991
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KFL32752.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ugpA2; sn-glycerol-3-phosphate ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1073_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1934..2851
DNA (918bp) protein (306aa)
Transmembrane component of ABC transporter protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQA8_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KKB76483.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1073_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2864..3940
DNA (1077bp) protein (359aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NCV2_RHILT
Glycerol-3-phosphate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL27524.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ugpC; glycerol-3-phosphate transporter ATP-binding subunit
SCN18_25_8_15_R2_B_scaffold_1073_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4126..5037
DNA (912bp) protein (304aa)
Xylose isomerase-like TIM barrel n=1 Tax=Rhizobium sp. RepID=L0ND62_RHISP
Myo-inositol catabolism protein {ECO:0000313|EMBL:KKB76485.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Sugar phosphate isomerase/epimerase
SCN18_25_8_15_R2_B_scaffold_1073_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5232..6365
DNA (1134bp) protein (378aa)
Putative flavoprotein involved in K+ transport n=1 Tax=Rhizobium sp. CF080 RepID=J2JAL3_9RHIZ
Putative oxidoreductase {ECO:0000313|EMBL:CDP49927.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Flavin-containing monooxygenase
SCN18_25_8_15_R2_B_scaffold_1073_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6445..7356
DNA (912bp) protein (304aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Putative ornithine cyclodeaminase protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UAC2_RHIRD
Ornithine cyclodeaminase {ECO:0000313|EMBL:KKB11389.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCN18_25_8_15_R2_B_scaffold_1073_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7534..8211
DNA (678bp) protein (226aa)
Transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VJB4_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB77588.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
GntR domain protein
SCN18_25_8_15_R2_B_scaffold_1073_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8363..9109
DNA (747bp) protein (249aa)
3-oxoacyl-(Acyl-carrier protein) reductase n=2 Tax=Agrobacterium RepID=A9CFQ0_AGRT5
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KKB11042.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
fabG; 3-oxoacyl-ACP reductase
SCN18_25_8_15_R2_B_scaffold_1073_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9169..10869)
DNA (1701bp) protein (567aa)
putative Xylulokinase (EC:2.7.1.17)
pentose kinase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F0A3
Pentose kinase {ECO:0000313|EMBL:KGT89137.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typographi.;"
SCN18_25_8_15_R2_B_scaffold_1073_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10873..12126
DNA (1254bp) protein (418aa)
Myo-inositol 2-dehydrogenase 1 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFL1_PELHB
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:KKB82633.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
myo-inositol 2-dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1073_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12331..13068)
DNA (738bp) protein (246aa)
Phosphonates metabolism transcriptional regulator PhnF n=1 Tax=Rhizobium sp. CF142 RepID=J2L7R2_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KKC34591.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
phnF; phosphonate metabolism transcriptional regulator PhnF
SCN18_25_8_15_R2_B_scaffold_1073_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13149..13595
DNA (447bp) protein (149aa)
Phosphonate metabolism PhnG n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KGY2_9RHIZ
Phosphonate C-P lyase system protein PhnG {ECO:0000313|EMBL:KFC67400.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phnG; C-P (carbon-phosphorus) lyase component protein
SCN18_25_8_15_R2_B_scaffold_1073_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13595..14185
DNA (591bp) protein (197aa)
Carbon-phosphorus lyase complex subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MHF7_9RHIZ
Phosphonate C-P lyase system protein PhnH {ECO:0000313|EMBL:KFC67401.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phosphonate C-P lyase system protein PhnH
SCN18_25_8_15_R2_B_scaffold_1073_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14189..15289
DNA (1101bp) protein (367aa)
carbon-phosphorus lyase complex subunit PhnI n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D9C7A7
Carbon-phosphorus lyase complex subunit PhnI {ECO:0000313|EMBL:KKB84527.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
phosphonate metabolism
SCN18_25_8_15_R2_B_scaffold_1073_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15432..16310
DNA (879bp) protein (293aa)
Phosphonate metabolism PhnJ n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4C5_9RHIZ
Phosphonate metabolism PhnJ {ECO:0000313|EMBL:KFC67403.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phnJ; Phosphonate metabolism PhnJ
SCN18_25_8_15_R2_B_scaffold_1073_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16461..17237
DNA (777bp) protein (259aa)
Phosphonate C-P lyase system protein PhnK n=2 Tax=Ochrobactrum intermedium RepID=C4WHR1_9RHIZ
Phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:KFC67404.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phnK; phosphonate C-P lyase system protein PhnK
SCN18_25_8_15_R2_B_scaffold_1073_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17419..18123
DNA (705bp) protein (235aa)
phosphonate ABC transporter ATPase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F3F48
Phosphonate C-P lyase system protein PhnL {ECO:0000313|EMBL:KFC67405.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phosphonate C-P lyase system protein PhnL
SCN18_25_8_15_R2_B_scaffold_1073_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18120..18728
DNA (609bp) protein (203aa)
Probable acetyltransferase protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DHR5_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:KKC41431.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
phosphonate metabolism protein
SCN18_25_8_15_R2_B_scaffold_1073_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18897..19769
DNA (873bp) protein (291aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Phosphonate ABC transporter, ATP-binding protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VUQ0_9RHIZ
phcN; phosphonates import ATP-binding protein PhnC
SCN18_25_8_15_R2_B_scaffold_1073_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19862..20776
DNA (915bp) protein (305aa)
phosphonate ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DCE669
Phosphonate ABC transporter, periplasmic phosphonate binding protein {ECO:0000313|EMBL:KFC66441.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phosphonate ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_1073_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20847..21806
DNA (960bp) protein (320aa)
ABC transporter, membrane spanning protein (Phosphonate) n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7D217_AGRT5
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:KFC66440.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phnE; Phosphonate ABC transporter, permease protein PhnE
SCN18_25_8_15_R2_B_scaffold_1073_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21809..23149
DNA (1341bp) protein (447aa)
phosphonate ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00037AE7E1
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:KFC66439.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phosphonate ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1073_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23257..24297)
DNA (1041bp) protein (347aa)
Putative sugar ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZV6_RHITR
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB83459.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
putative sugar ABC transporter, ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_1073_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24494..25714
DNA (1221bp) protein (407aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Kynureninase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1U5_POLGS
kynureninase KynU
SCN18_25_8_15_R2_B_scaffold_1073_26
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25784..28504
DNA (2721bp) protein (907aa)
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPK1_9RHIZ
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EHK57344.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase
SCN18_25_8_15_R2_B_scaffold_1073_27
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28593..28946)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG89_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07614.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1073_28
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29111..29707
DNA (597bp) protein (199aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG88_PELHB
chemotaxis protein CheD
SCN18_25_8_15_R2_B_scaffold_1073_29
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29894..30427
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC32667.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
Displaying 29 items

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