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SCN18_25_8_15_R2_B_scaffold_1156

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1156_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131..1111
DNA (981bp) protein (327aa)
UPI0003CE5E56 related cluster n=1 Tax=unknown RepID=UPI0003CE5E56
Uncharacterized protein {ECO:0000313|EMBL:KKC32257.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1156_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1311..2507)
DNA (1197bp) protein (399aa)
Peptidase M23B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9T3_PELHB
Lipoprotein NlpD {ECO:0000313|EMBL:CDP53630.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
peptidase M23B
SCN18_25_8_15_R2_B_scaffold_1156_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3060..3824)
DNA (765bp) protein (255aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
5'-nucleotidase SurE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9T5_PELHB
5'-nucleotidase
SCN18_25_8_15_R2_B_scaffold_1156_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3821..5179)
DNA (1359bp) protein (453aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Serine--tRNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9T6_PELHB
seryl-tRNA synthetase
SCN18_25_8_15_R2_B_scaffold_1156_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5427..6185)
DNA (759bp) protein (253aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Nitratireductor indicus C115 RepID=K2P7Y2_9RHIZ
pdxJ; pyridoxal phosphate biosynthesis protein PdxJ
SCN18_25_8_15_R2_B_scaffold_1156_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6348..7235)
DNA (888bp) protein (296aa)
UPI0003CF019B related cluster n=1 Tax=unknown RepID=UPI0003CF019B
Uncharacterized protein {ECO:0000313|EMBL:CDX36738.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1156_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7283..7837)
DNA (555bp) protein (185aa)
Acetolactate synthase small subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REX4_PELHB
Acetolactate synthase {ECO:0000313|EMBL:KKB13015.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
acetolactate synthase small subunit
SCN18_25_8_15_R2_B_scaffold_1156_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7849..9618)
DNA (1770bp) protein (590aa)
Acetolactate synthase large subunit {ECO:0000313|EMBL:CDP51859.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CDP51859.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Acetolactate synthase large subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REX5_PELHB
acetolactate synthase large subunit
SCN18_25_8_15_R2_B_scaffold_1156_9
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9851..10228)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UJU6_SINMW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR63926.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCN18_25_8_15_R2_B_scaffold_1156_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10286..10624)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000370D348
Uncharacterized protein {ECO:0000313|EMBL:CDP51377.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
DGPFAETKE domain protein
SCN18_25_8_15_R2_B_scaffold_1156_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10834..11712
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B38B6F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE86722.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCN18_25_8_15_R2_B_scaffold_1156_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11753..12643
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036063F9
sugar phosphate isomerase/epimerase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_25_8_15_R2_B_scaffold_1156_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12640..13395
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000374854F
NAD-dependent epimerase/dehydratase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCN18_25_8_15_R2_B_scaffold_1156_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13500..14714
DNA (1215bp) protein (405aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CVY9_PAESJ
mandelate racemase/muconate lactonizing protein
D-galactonate dehydratase family member Pjdr2_1176; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
SCN18_25_8_15_R2_B_scaffold_1156_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14853..15635)
DNA (783bp) protein (261aa)
3-hexulose-6-phosphate synthase n=1 Tax=Methylomonas sp. MK1 RepID=UPI0003764F02
hps1; 3-hexulose-6-phosphate synthase
Tax=RBG_13_Actinobacteria_55_18_curated
SCN18_25_8_15_R2_B_scaffold_1156_16
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15762..17036)
DNA (1275bp) protein (425aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:KFL27419.1}; EC=2.5.1.49 {ECO:0000313|EMBL:KFL27419.1};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
o-acetylhomoserine/o-acetylserine sulfhydrylase (EC:2.5.1.47)
O-acetylhomoserine (Thiol)-lyase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRP5_9SPHN
SCN18_25_8_15_R2_B_scaffold_1156_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17186..18091)
DNA (906bp) protein (302aa)
UPI0003CEC70D related cluster n=1 Tax=unknown RepID=UPI0003CEC70D
Signal protein PDZ {ECO:0000313|EMBL:ESY72009.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
PDZ/DHR/GLGF domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1156_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18467..19330
DNA (864bp) protein (288aa)
Flagellar motor rotation protein MotA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Q0_PELHB
Flagellar motor protein MotA {ECO:0000313|EMBL:KFL25179.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
flagellar motor rotation protein MotA
SCN18_25_8_15_R2_B_scaffold_1156_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19341..20255
DNA (915bp) protein (305aa)
Flagellar motor rotation protein MotB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Q1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB12596.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
flagellar motor rotation protein MotB
SCN18_25_8_15_R2_B_scaffold_1156_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20320..20604)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JTP7_AGRVS
17 kDa surface antigen
17 kDa surface antigen {ECO:0000313|EMBL:CDM58962.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
SCN18_25_8_15_R2_B_scaffold_1156_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20734..22149
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REX7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC30956.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1156_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22154..23005)
DNA (852bp) protein (284aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
tRNA dimethylallyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFB7_PELHB
tRNA delta(2)-isopentenylpyrophosphate transferase
SCN18_25_8_15_R2_B_scaffold_1156_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23061..23933
DNA (873bp) protein (291aa)
Phosphoserine phosphatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFB8_PELHB
Phosphoserine phosphatase {ECO:0000313|EMBL:KFL27487.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
phosphoserine phosphatase
SCN18_25_8_15_R2_B_scaffold_1156_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23930..24475
DNA (546bp) protein (182aa)
Acetyltransferase, GNAT family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFB9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL27486.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
acetyltransferase, GNAT family
SCN18_25_8_15_R2_B_scaffold_1156_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24462..25964)
DNA (1503bp) protein (501aa)
UPI0003CE80E4 related cluster n=2 Tax=unknown RepID=UPI0003CE80E4
Uncharacterized protein {ECO:0000313|EMBL:KFL27485.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
periplasmic serine protease, Do/DeqQ family
SCN18_25_8_15_R2_B_scaffold_1156_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26154..27167)
DNA (1014bp) protein (338aa)
UPI0003CE8007 related cluster n=1 Tax=unknown RepID=UPI0003CE8007
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
HflC protein
SCN18_25_8_15_R2_B_scaffold_1156_27
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27171..28151)
DNA (981bp) protein (327aa)
HflK protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFC3_PELHB
Tail fiber protein {ECO:0000313|EMBL:KFL27483.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
HflK protein
Displaying 27 items

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