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SCN18_25_8_15_R2_B_scaffold_1162

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1162_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..579
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003727458
Glutathione S-transferase {ECO:0000313|EMBL:KFB08114.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
glutathione S-transferase family protein
SCN18_25_8_15_R2_B_scaffold_1162_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(576..1616)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000377B8FB
Putative oxidoreductase protein {ECO:0000313|EMBL:CDP50937.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
luciferase-like monooxygenase
SCN18_25_8_15_R2_B_scaffold_1162_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1690..2373)
DNA (684bp) protein (228aa)
Putative membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGR8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC37331.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1162_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2596..3012)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Polysphondylium pallidum RepID=D3AZQ8_POLPA
Uncharacterized protein {ECO:0000313|EMBL:KKC31293.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
infB; translation initiation factor IF-2
SCN18_25_8_15_R2_B_scaffold_1162_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3144..3731)
DNA (588bp) protein (196aa)
UPI0003CFBBC0 related cluster n=1 Tax=unknown RepID=UPI0003CFBBC0
UPF0114 protein VE26_09955 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1162_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3865..6387)
DNA (2523bp) protein (841aa)
OmpA/MotB domain protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FEE0_9RHIZ
Ferric siderophore transport system, periplasmic binding protein TonB {ECO:0000313|EMBL:KFC64886.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ferric siderophore transport system, periplasmic binding protein TonB
SCN18_25_8_15_R2_B_scaffold_1162_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6697..7521
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGR3_PELHB
Membrane protein {ECO:0000313|EMBL:KFL29086.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1162_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7655..8386)
DNA (732bp) protein (244aa)
Putative 26 kDa periplasmic immunogenic protein n=1 Tax=uncultured bacterium RepID=L7RXN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFL27334.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1162_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8615..9769
DNA (1155bp) protein (385aa)
Fumarylacetoacetate (FAA) hydrolase family protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VHE3_9RHIZ
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:KFL27335.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
fumarylacetoacetate hydrolase family protein
SCN18_25_8_15_R2_B_scaffold_1162_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9858..11297
DNA (1440bp) protein (480aa)
Aldehyde dehydrogenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GX4_MESSB
Aldehyde dehydrogenase {ECO:0000313|EMBL:KKB12979.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
aldehyde dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1162_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11478..12110
DNA (633bp) protein (211aa)
Outer membrane protein, putative n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CHG1_SHEPW
outer membrane protein
Outer membrane protein, putative {ECO:0000313|EMBL:ACJ27087.1}; TaxID=225849 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella piezotolerans (strain WP3 / JCM 13877).;"
SCN18_25_8_15_R2_B_scaffold_1162_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12167..12721)
DNA (555bp) protein (185aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0K1M1_ARTS2
Dihydrofolate reductase {ECO:0000313|EMBL:KFC68601.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
deaminase-reductase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1162_trna_1
unknown

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comp(12837..12909)
DNA (73bp)
transferRNA Met
SCN18_25_8_15_R2_B_scaffold_1162_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12989..13291)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB08794.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCN18_25_8_15_R2_B_scaffold_1162_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13412..13966)
DNA (555bp) protein (185aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
Putative 3-methyladenine DNA glycosylase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YIN4_MOBAS
3-methyladenine DNA glycosylase
SCN18_25_8_15_R2_B_scaffold_1162_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14006..14236)
DNA (231bp) protein (77aa)
SCN18_25_8_15_R2_B_scaffold_1162_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14350..15753
DNA (1404bp) protein (468aa)
Putative phosphoglucomutase/phosphomannomutase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YK67_MOBAS
Phosphomannomutase {ECO:0000313|EMBL:KKB12943.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
phosphoglucomutase/phosphomannomutase subunit alpha/beta
SCN18_25_8_15_R2_B_scaffold_1162_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15844..16593
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKE0_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EXL01285.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1162_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16771..17025)
DNA (255bp) protein (85aa)
Transglycosylase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7H8_9RHIZ
Transglycosylase associated protein {ECO:0000313|EMBL:CDP52646.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
transglycosylase
SCN18_25_8_15_R2_B_scaffold_1162_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17152..17769)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000382F168
Uncharacterized protein {ECO:0000313|EMBL:KFL29061.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
lysine exporter protein LysE/YggA
SCN18_25_8_15_R2_B_scaffold_1162_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17921..18451)
DNA (531bp) protein (177aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY23_PARL1
deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ABS64806.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R2_B_scaffold_1162_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18560..18961)
DNA (402bp) protein (134aa)
SCN18_25_8_15_R2_B_scaffold_1162_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19067..20599
DNA (1533bp) protein (511aa)
transcriptional regulator n=1 Tax=Rhizobium gallicum RepID=UPI000382752A
Uncharacterized protein {ECO:0000313|EMBL:KEA07734.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
transcriptional regulator domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1162_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20710..20907
DNA (198bp) protein (66aa)
SCN18_25_8_15_R2_B_scaffold_1162_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20914..21855)
DNA (942bp) protein (314aa)
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:CDP50875.1}; EC=3.2.2.1 {ECO:0000313|EMBL:CDP50875.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7H5_PELHB
inosine-uridine preferring nucleoside hydrolase
SCN18_25_8_15_R2_B_scaffold_1162_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21995..23230
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PLH6_9RHIZ
Transport protein {ECO:0000313|EMBL:CDP50874.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1162_26
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23303..25153
DNA (1851bp) protein (617aa)
Glutathione-regulated potassium-efflux system protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98M13_RHILO
Putative Glutathione-regulated potassium-efflux sy stem protein KefB {ECO:0000313|EMBL:CDP50873.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
glutathione-regulated potassium-efflux system protein
SCN18_25_8_15_R2_B_scaffold_1162_27
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25452..27929
DNA (2478bp) protein (826aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Phosphorylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG44_PELHB
glycogen phosphorylase
Displaying 28 items

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