ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1423

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1423_1
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..679
DNA (678bp) protein (226aa)
Metallophosphoesterase n=1 Tax=Rhizobium sp. RepID=L0NLM6_RHISP
Uncharacterized protein {ECO:0000313|EMBL:KKB77281.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
metallophosphoesterase
SCN18_25_8_15_R2_B_scaffold_1423_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

690..1862
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036D77CE
Uncharacterized protein {ECO:0000313|EMBL:KHK90015.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
glycosyl transferase family protein
SCN18_25_8_15_R2_B_scaffold_1423_3
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2101..3402
DNA (1302bp) protein (434aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Beggiatoa alba B18LD RepID=I3CIB8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS42813.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1423_4
unknown

Not on your lists

3399..4100
DNA (702bp) protein (234aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1423_5
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4175..5428
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WJ44_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ19831.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SCN18_25_8_15_R2_B_scaffold_1423_6
SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, Plasmid-like

Not on your lists

comp(5564..6367)
DNA (804bp) protein (268aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase id=1821711 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCN18_25_8_15_R2_B_scaffold_1423_7
unknown

Not on your lists

comp(6364..7716)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00035F42EC
SCN18_25_8_15_R2_B_scaffold_1423_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7722..8525)
DNA (804bp) protein (268aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ACL60453.1}; EC=2.4.1.187 {ECO:0000313|EMBL:ACL60453.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
glycosyl transferase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4C281
SCN18_25_8_15_R2_B_scaffold_1423_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8485..10602)
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGW8_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53121.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_25_8_15_R2_B_scaffold_1423_10
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10617..11552)
DNA (936bp) protein (312aa)
SCN18_25_8_15_R2_B_scaffold_1423_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11570..12307)
DNA (738bp) protein (246aa)
Exopolysaccharide production protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGV4_PELHB
exopolysaccharide production protein
Exopolysaccharide production protein {ECO:0000313|EMBL:AEQ53107.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_25_8_15_R2_B_scaffold_1423_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12562..13017)
DNA (456bp) protein (152aa)
SCN18_25_8_15_R2_B_scaffold_1423_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13468..14427
DNA (960bp) protein (320aa)
DeoR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F960_9RHIZ
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KKB84240.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
transcriptional regulator, operon regulator; SmoC
SCN18_25_8_15_R2_B_scaffold_1423_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14582..15886
DNA (1305bp) protein (435aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI000367DF35
Putative ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:CDX27128.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ABC-type sugar transport system, periplasmic component
SCN18_25_8_15_R2_B_scaffold_1423_15
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16022..16891
DNA (870bp) protein (290aa)
Mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BS9_MESSB
binding-protein-dependent transport system inner membrane protein
Mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein {ECO:0000313|EMBL:ABG65146.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_25_8_15_R2_B_scaffold_1423_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16997..17824
DNA (828bp) protein (276aa)
mannitol ABC transporter permease n=1 Tax=Martelella mediterranea RepID=UPI0003652AD9
mannitol ABC transporter permease
Mannitol ABC transporter permease {ECO:0000313|EMBL:AJY45256.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_25_8_15_R2_B_scaffold_1423_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17836..18837
DNA (1002bp) protein (334aa)
glycerol-3-phosphate ABC transporter ATPase n=1 Tax=Rhizobium meliloti RepID=UPI000370078C
Glycerol-3-phosphate ABC transporter ATPase {ECO:0000313|EMBL:KFL31330.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC sorbitol/mannitol transporter, ATPase subunit
SCN18_25_8_15_R2_B_scaffold_1423_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18886..20364
DNA (1479bp) protein (493aa)
Multiple polyol-specific dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDX1_PELHB
Mannitol dehydrogenase {ECO:0000313|EMBL:KFL25756.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
multiple polyol-specific dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1423_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20483..21634
DNA (1152bp) protein (384aa)
galactonate dehydratase n=1 Tax=Kaistia granuli RepID=UPI0003763BD1
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:CDN95616.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
galactonate dehydratase
SCN18_25_8_15_R2_B_scaffold_1423_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21765..22514
DNA (750bp) protein (250aa)
ROK family protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WP29_RHOS5
Uncharacterized protein {ECO:0000313|EMBL:KKB86034.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Transcriptional regulator FrcR for fructose utilization, ROK family
Displaying 20 items

View Taxonomy