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SCN18_25_8_15_R2_B_scaffold_2209

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2209_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..680
DNA (678bp) protein (226aa)
Biotin-protein ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R873_PELHB
Biotin {ECO:0000313|EMBL:KKC33848.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
biotin-protein ligase
SCN18_25_8_15_R2_B_scaffold_2209_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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680..2359
DNA (1680bp) protein (560aa)
Metallo-beta-lactamase family protein, RNA-specific n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R874_PELHB
Metallo-beta-lactamase family protein, RNA-specif ic {ECO:0000313|EMBL:CDP54214.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
metallo-beta-lactamase family protein, RNA-specific
SCN18_25_8_15_R2_B_scaffold_2209_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2369..2614
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R875_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08491.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2209_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3169..4518
DNA (1350bp) protein (450aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01570}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Proline--tRNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R876_PELHB
prolyl-tRNA synthetase
SCN18_25_8_15_R2_B_scaffold_2209_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4515..5879
DNA (1365bp) protein (455aa)
Lipoprotein releasing system transmembrane protein LolC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R877_PELHB
Multidrug ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB08494.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
lipoprotein releasing system transmembrane protein LolC
SCN18_25_8_15_R2_B_scaffold_2209_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5876..7237
DNA (1362bp) protein (454aa)
Lipoprotein releasing system transmembrane protein LolC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R877_PELHB
Multidrug ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB08494.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
lipoprotein releasing system transmembrane protein LolC
SCN18_25_8_15_R2_B_scaffold_2209_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7230..7916
DNA (687bp) protein (229aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Lipoprotein releasing system ATP-binding protein LolD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R878_PELHB
lipoprotein releasing system ATP-binding protein LolD
SCN18_25_8_15_R2_B_scaffold_2209_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7913..8302)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISN9_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:CDP50849.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2209_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8306..9130)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A8Z2_9PROT
2-methylisocitrate lyase {ECO:0000313|EMBL:KJV25151.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2209_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9263..9361
DNA (99bp) protein (33aa)
SCN18_25_8_15_R2_B_scaffold_2209_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9426..12896
DNA (3471bp) protein (1157aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
DNA polymerase III alpha subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R879_PELHB
DNA polymerase III subunit alpha
SCN18_25_8_15_R2_B_scaffold_2209_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13723..14361
DNA (639bp) protein (213aa)
30S ribosomal protein S2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R880_PELHB
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
30S ribosomal protein S2
Displaying 12 items

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