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SCN18_25_8_15_R2_B_scaffold_3882

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3882_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1..1422)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367CF87
Uncharacterized protein {ECO:0000313|EMBL:EPD85280.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCN18_25_8_15_R2_B_scaffold_3882_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1541..3334
DNA (1794bp) protein (598aa)
ABC transporter ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D899F
ABC transporter ATPase {ECO:0000313|EMBL:KEP75170.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
ATPase components of ABC transporters with duplicated ATPase domains
SCN18_25_8_15_R2_B_scaffold_3882_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3359..3856)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9J3_9MICO
MarR family transcriptional regulator {ECO:0000313|EMBL:KIC60218.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
marR; transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3882_trna_1
unknown

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3916..3987
DNA (72bp)
transferRNA Gln
SCN18_25_8_15_R2_B_scaffold_3882_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3989..5464
DNA (1476bp) protein (492aa)
Bifunctional protein GlmU n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A816_9MICO
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
glmU; N-acetylglucosamine-1-phosphate uridyltransferase
SCN18_25_8_15_R2_B_scaffold_3882_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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5439..6473
DNA (1035bp) protein (345aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ribose-phosphate pyrophosphokinase n=1 Tax=Microbacterium yannicii RepID=UPI000316FFCB
psrA; phosphoribosylpyrophosphate synthetase
SCN18_25_8_15_R2_B_scaffold_3882_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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6584..7033
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364E0A3
Uncharacterized protein {ECO:0000313|EMBL:CDK01046.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3882_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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7041..7922
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003823DC0
Membrane-associated lipoprotein {ECO:0000313|EMBL:CDK01045.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
membrane-associated lipoprotein
SCN18_25_8_15_R2_B_scaffold_3882_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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7942..9507
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003138AFE
Flavodoxin reductase {ECO:0000313|EMBL:KIC60225.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
flavodoxin reductase (ferredoxin-NADPH reductase) family 1
SCN18_25_8_15_R2_B_scaffold_3882_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(9553..11025)
DNA (1473bp) protein (491aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
histidine kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349D853
signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_3882_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11022..11750)
DNA (729bp) protein (243aa)
transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003825495
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:BAJ75926.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_3882_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12075..13064)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035DB8E3
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CDK01487.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
NAD-dependent epimerase/dehydratase
SCN18_25_8_15_R2_B_scaffold_3882_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13133..14695)
DNA (1563bp) protein (521aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|RuleBase:RU000485};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
6-phosphogluconate dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI000313675E
gnd; 6-phosphogluconate dehydrogenase
Displaying 13 items

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