ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1334

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1334_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

1..480
DNA (480bp) protein (160aa)
SCN18_25_8_15_R2_B_scaffold_1334_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

521..1159
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003772E68
Lysine transporter LysE {ECO:0000313|EMBL:KIC57107.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
lysine exporter protein LysE/YggA
SCN18_25_8_15_R2_B_scaffold_1334_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1183..2031)
DNA (849bp) protein (283aa)
short-chain dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI0002EF084C
Citronellol/citronellal dehydrogenase {ECO:0000313|EMBL:EZP29252.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
dehydrogenase with different specificities
SCN18_25_8_15_R2_B_scaffold_1334_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2028..2828)
DNA (801bp) protein (267aa)
enoyl-CoA hydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037CEAE8
Enoyl-CoA hydratase {ECO:0000313|EMBL:EXJ52593.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
enoyl-CoA hydratase/carnithine racemase
SCN18_25_8_15_R2_B_scaffold_1334_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2825..3586)
DNA (762bp) protein (254aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI0002E55CD1
dehydrogenase with different specificities
Dehydrogenase with different specificities {ECO:0000313|EMBL:BAJ74865.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_1334_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3703..4101
DNA (399bp) protein (133aa)
phosphoribosylglycinamide formyltransferase n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C721A
Uncharacterized protein {ECO:0000313|EMBL:EZP29247.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1334_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4112..4900)
DNA (789bp) protein (263aa)
ABC transporter n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D148D
ABC transporter {ECO:0000313|EMBL:KHK99816.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ABC transporter, permease component
SCN18_25_8_15_R2_B_scaffold_1334_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4897..6354)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CA77A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXJ52603.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ABC transporter, ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_1334_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6366..7001)
DNA (636bp) protein (212aa)
membrane protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AF02D
Membrane protein {ECO:0000313|EMBL:EYT60326.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1334_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

7142..8554
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000301D742
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:BAJ74859.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_1334_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

9176..9400
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8J4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06776.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCN18_25_8_15_R2_B_scaffold_1334_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

9397..9654
DNA (258bp) protein (86aa)
Helix-turn-helix domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8J3_9MICO
Helix-turn-helix domain protein {ECO:0000313|EMBL:EIC06775.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCN18_25_8_15_R2_B_scaffold_1334_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9635..10222)
DNA (588bp) protein (196aa)
Resolvase domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8J2_9MICO
Resolvase domain-containing protein {ECO:0000313|EMBL:EIC06774.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
resolvase
SCN18_25_8_15_R2_B_scaffold_1334_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10254..11063)
DNA (810bp) protein (270aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8J0_9MICO
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EIC06772.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
fic; Fic family protein
SCN18_25_8_15_R2_B_scaffold_1334_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11065..11307)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8I9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06771.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1334_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11584..12084)
DNA (501bp) protein (167aa)
AsnC family transcriptional regulator n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003745C3D
Leucine-responsive regulatory protein {ECO:0000313|EMBL:KJL21287.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
AsnC family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1334_17
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12339..14312)
DNA (1974bp) protein (658aa)
ABC-1 domain-containing protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KB33_SACES
Uncharacterized protein {ECO:0000313|EMBL:KJL21284.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ABC-1 domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1334_18
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14483..16609
DNA (2127bp) protein (709aa)
Putative multi-drug/solvent efflux protein n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7NNL2_9MICC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY03184.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
SCN18_25_8_15_R2_B_scaffold_1334_19
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

16572..17852
DNA (1281bp) protein (427aa)
Two-component sensor histidine kinase n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7NEA5_9MICC
Two-component sensor histidine kinase {ECO:0000313|EMBL:EMR00145.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1334_20
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17852..18472
DNA (621bp) protein (207aa)
Two component LuxR family transcriptional regulator n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7MYX0_9MICC
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:EMR00146.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
two-component system response regulator
SCN18_25_8_15_R2_B_scaffold_1334_21
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

18581..19030
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037253F7
Membrane protein {ECO:0000313|EMBL:EYT60559.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1334_22
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

19477..20073
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B706_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84349.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
site-specific recombinase, DNA invertase Pin
SCN18_25_8_15_R2_B_scaffold_1334_23
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

20084..21469
DNA (1386bp) protein (462aa)
Mu transposase/integrase n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MCF2_ARTPP
Transposase {ECO:0000313|EMBL:KGJ71767.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
Mu transposase/integrase
SCN18_25_8_15_R2_B_scaffold_1334_24
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

21469..22278
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQB3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL45907.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_1334_25
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(22964..23497)
DNA (534bp) protein (178aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D47693
signal peptidase
SCN18_25_8_15_R2_B_scaffold_1334_26
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(23494..24102)
DNA (609bp) protein (203aa)
cadmium transporter n=1 Tax=Microbacterium barkeri RepID=UPI0002FA09C1
Cadmium transporter {ECO:0000313|EMBL:KDA07050.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
cadmium resistance transporter
SCN18_25_8_15_R2_B_scaffold_1334_27
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(24102..24299)
DNA (198bp) protein (66aa)
cadmium-transporting ATPase (EC:3.6.3.3)
ATPase P n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00035F3904
Contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89888.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
Displaying 27 items

View Taxonomy