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SCN18_25_8_15_R2_B_scaffold_1408

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1408_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3..431
DNA (429bp) protein (143aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
DNA polymerase n=1 Tax=Microbacterium sp. TS-1 RepID=U2X5Z4_9MICO
polA; DNA polymerase I - 3'-5' exonuclease and polymerase domains
SCN18_25_8_15_R2_B_scaffold_1408_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

497..2170
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031FB18A
Uncharacterized protein {ECO:0000313|EMBL:KEP75677.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

2269..3324
DNA (1056bp) protein (352aa)
Alkanal monooxygenase alpha chain {ECO:0000313|EMBL:KJL18713.1}; EC=1.14.14.3 {ECO:0000313|EMBL:KJL18713.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F34C05
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
SCN18_25_8_15_R2_B_scaffold_1408_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3334..4707
DNA (1374bp) protein (458aa)
membrane protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D70029
Permease of the major facilitator superfamily {ECO:0000313|EMBL:GAD32894.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
permease of the major facilitator superfamily
SCN18_25_8_15_R2_B_scaffold_1408_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

4727..5491
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D64DEA
Lysophospholipase L1 {ECO:0000313|EMBL:CDK00900.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
lysophospholipase L1
SCN18_25_8_15_R2_B_scaffold_1408_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

5617..5877
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E0B4D9
Uncharacterized protein {ECO:0000313|EMBL:GAD32896.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5966..7300)
DNA (1335bp) protein (445aa)
Major facilitator superfamily MFS_1 n=2 Tax=Microbacterium RepID=H8E2Z6_9MICO
MFS transporter {ECO:0000313|EMBL:KIC57382.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
permease of the major facilitator superfamily
SCN18_25_8_15_R2_B_scaffold_1408_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7359..7862)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003773803
Uncharacterized protein {ECO:0000313|EMBL:KJL33828.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7938..8417)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EQ66_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW41336.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
SCN18_25_8_15_R2_B_scaffold_1408_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(8425..9582)
DNA (1158bp) protein (386aa)
Predicted GTPase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9U2_MICTS
Uncharacterized protein {ECO:0000313|EMBL:EXJ50471.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
GTPase
SCN18_25_8_15_R2_B_scaffold_1408_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

9651..10223
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037618CF
SCN18_25_8_15_R2_B_scaffold_1408_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10791..11516)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCU5_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ76175.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_1408_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11605..12216
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003132A99
Membrane transport protein {ECO:0000313|EMBL:KJL33295.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
permease
SCN18_25_8_15_R2_B_scaffold_1408_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

12330..12887
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D95C5A
Uncharacterized protein {ECO:0000313|EMBL:CDK00888.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12963..14918)
DNA (1956bp) protein (652aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C973C
dxs; deoxyxylulose-5-phosphate synthase
SCN18_25_8_15_R2_B_scaffold_1408_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15018..17852)
DNA (2835bp) protein (945aa)
Aconitate hydratase {ECO:0000313|EMBL:KIC57293.1}; EC=4.2.1.3 {ECO:0000313|EMBL:KIC57293.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
aconitate hydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379E2B5
acnA; aconitase A
SCN18_25_8_15_R2_B_scaffold_1408_17
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17988..18773)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003745430
Uncharacterized protein {ECO:0000313|EMBL:KDA05602.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_18
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18770..19366)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E3FF96
Uncharacterized protein {ECO:0000313|EMBL:GAD33261.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_19
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(19363..19803)
DNA (441bp) protein (147aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FA2F6
dut; dUTPase
SCN18_25_8_15_R2_B_scaffold_1408_20
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

19828..20313
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003498F4A
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KHK97541.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCN18_25_8_15_R2_B_scaffold_1408_21
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(20291..20581)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FD68D9
Uncharacterized protein {ECO:0000313|EMBL:ERK72635.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_22
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

20803..21831
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036D9F51
Uncharacterized protein {ECO:0000313|EMBL:EPD83344.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_23
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(21835..22944)
DNA (1110bp) protein (370aa)
Uncharacterized proteins of the AP superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEZ0_MICTS
Nucleotide pyrophosphatase {ECO:0000313|EMBL:KEP76285.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_24
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

23011..25464
DNA (2454bp) protein (818aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
DNA topoisomerase IV subunit A n=1 Tax=Microbacterium sp. TS-1 RepID=U2XJT8_9MICO
gyrA; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
SCN18_25_8_15_R2_B_scaffold_1408_25
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(25493..27565)
DNA (2073bp) protein (691aa)
DNA gyrase subunit B n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B455_9MICO
DNA gyrase subunit B {ECO:0000313|EMBL:EPD83339.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
gyrB; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
SCN18_25_8_15_R2_B_scaffold_1408_26
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

27734..27958
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E97B04
Uncharacterized protein {ECO:0000313|EMBL:EZP29679.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1408_27
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(28012..29076)
DNA (1065bp) protein (355aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036EFED3
alanine racemase
SCN18_25_8_15_R2_B_scaffold_1408_28
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(29073..29741)
DNA (669bp) protein (223aa)
Alanine racemase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEY5_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KHK97341.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
alanine racemase
SCN18_25_8_15_R2_B_scaffold_1408_29
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(29738..30766)
DNA (1029bp) protein (343aa)
flagellar biosynthesis protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380503F
Flagellar biosynthesis protein {ECO:0000313|EMBL:KDA05593.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
flagellar biosynthesis/type III secretory pathway protein
SCN18_25_8_15_R2_B_scaffold_1408_30
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

30842..31876
DNA (1035bp) protein (345aa)
ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XJA9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA05592.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
flagellar biosynthesis/type III secretory pathway protein
Displaying items 1-30 of 31 in total

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