ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1866

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1866_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3..194)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Corynebacterium glucuronolyticum ATCC 51866 RepID=C2GG68_9CORY
ATPase AAA {ECO:0000313|EMBL:EYT48912.1}; TaxID=1249481 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium muris UCD-AY4.;"
SCN18_25_8_15_R2_B_scaffold_1866_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(334..684)
DNA (351bp) protein (117aa)
multidrug transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036201A6
Antiseptic resistance protein {ECO:0000313|EMBL:KJL21285.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
drug resistance efflux protein
SCN18_25_8_15_R2_B_scaffold_1866_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(681..1604)
DNA (924bp) protein (308aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003642AA1
fmt; methionyl-tRNA formyltransferase
SCN18_25_8_15_R2_B_scaffold_1866_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1613..3595)
DNA (1983bp) protein (661aa)
Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FDDB0
primosomal protein N' (replication factor Y) - superfamily II helicase
SCN18_25_8_15_R2_B_scaffold_1866_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3627..4820)
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
S-adenosylmethionine synthase n=1 Tax=Microbacterium RepID=UPI00037E04F4
metK; S-adenosylmethionine synthetase
SCN18_25_8_15_R2_B_scaffold_1866_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4925..5179)
DNA (255bp) protein (85aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Microbacterium yannicii RepID=UPI0002F5285A
rpoZ; DNA-directed RNA polymerase, subunit K/omega
SCN18_25_8_15_R2_B_scaffold_1866_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5270..5845)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036CFCD8
CoA-binding protein {ECO:0000313|EMBL:KDA06298.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
CoA-binding protein
SCN18_25_8_15_R2_B_scaffold_1866_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5842..7161)
DNA (1320bp) protein (440aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:EZP29755.1}; EC=2.5.1.49 {ECO:0000313|EMBL:EZP29755.1};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003828E6D
SCN18_25_8_15_R2_B_scaffold_1866_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7199..9232)
DNA (2034bp) protein (678aa)
acetyl-CoA synthetase n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003611603
Acetate/CoA ligase {ECO:0000313|EMBL:CDK00928.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
acetate/CoA ligase
SCN18_25_8_15_R2_B_scaffold_1866_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9234..10064)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K189_9MICO
Alkanesulfonate transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDK00929.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
binding-protein-dependent transport system inner membrane protein
SCN18_25_8_15_R2_B_scaffold_1866_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10061..11104)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037D788B
Aliphatic sulfonates family ABC transporter,periplasmic ligand-binding protein {ECO:0000313|EMBL:CDK00930.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
aliphatic sulfonate ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_1866_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11101..11952)
DNA (852bp) protein (284aa)
Bicarbonate transport ATP-binding protein CmpD {ECO:0000313|EMBL:KJQ54923.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ54923.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFK7_9MICO
ABC transporter
SCN18_25_8_15_R2_B_scaffold_1866_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12006..12902)
DNA (897bp) protein (299aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
guanylate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003480804
gmk; guanylate kinase
SCN18_25_8_15_R2_B_scaffold_1866_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12895..13785)
DNA (891bp) protein (297aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032220};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIK7_9MICO
orotidine-5'-phosphate decarboxylase
SCN18_25_8_15_R2_B_scaffold_1866_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13782..17069)
DNA (3288bp) protein (1096aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Microbacterium sp. TS-1 RepID=U2X5X0_9MICO
carB; carbamoylphosphate synthase large subunit
SCN18_25_8_15_R2_B_scaffold_1866_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17069..17191)
DNA (123bp) protein (41aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
carbamoyl phosphate synthase small subunit, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6AACE
carA; carbamoylphosphate synthase small subunit
Displaying 16 items

View Taxonomy