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SCN18_25_8_15_R2_B_scaffold_1961

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1961_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1..75
DNA (75bp) protein (25aa)
SCN18_25_8_15_R2_B_scaffold_1961_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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118..477
DNA (360bp) protein (120aa)
Fe-S protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362ACF3
Fe-S protein {ECO:0000313|EMBL:EXJ51126.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Fe-S protein
SCN18_25_8_15_R2_B_scaffold_1961_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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524..1966
DNA (1443bp) protein (481aa)
major facilitator transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FC93B
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ73601.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_1961_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2091..2939)
DNA (849bp) protein (283aa)
ABC transporter n=1 Tax=Microbacterium yannicii RepID=UPI0002FA8B74
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
putative multidrug export ABC transporterpermease
SCN18_25_8_15_R2_B_scaffold_1961_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2936..3823)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E193B6
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC-2 type transporter
SCN18_25_8_15_R2_B_scaffold_1961_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3820..4761)
DNA (942bp) protein (314aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1B7_9MICO
Nodulation ABC transporter NodI {ECO:0000313|EMBL:EZP26115.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
putative multidrug export ABC transporter ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_1961_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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4856..6829
DNA (1974bp) protein (658aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DDD647
Uncharacterized protein {ECO:0000313|EMBL:CDJ99725.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
multidrug ABC transporter ATPase/permease
SCN18_25_8_15_R2_B_scaffold_1961_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(6903..8777)
DNA (1875bp) protein (625aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
phosphoenolpyruvate carboxykinase n=1 Tax=Microbacterium yannicii RepID=UPI0002FF5138
pckG; phosphoenolpyruvate carboxykinase (GTP)
SCN18_25_8_15_R2_B_scaffold_1961_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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8902..10344
DNA (1443bp) protein (481aa)
Transcriptional regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2XCJ3_9MICO
Transcriptional regulator {ECO:0000313|EMBL:GAD35701.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hipB; transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1961_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(10439..11710)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00035E18F5
Monooxygenase {ECO:0000313|EMBL:AJW77886.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
acyl-CoA dehydrogenase type 2 domain
SCN18_25_8_15_R2_B_scaffold_1961_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(11731..12957)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI00031E2E2D
Dibenzothiophene desulfurization enzyme C {ECO:0000313|EMBL:KJL32479.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1961_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(12954..14384)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RBU6_CLAMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ00497.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
SCN18_25_8_15_R2_B_scaffold_1961_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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14627..15937
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI000311991E
Uncharacterized protein {ECO:0000313|EMBL:AJW77884.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
family 1 extracellular solute-binding protein
SCN18_25_8_15_R2_B_scaffold_1961_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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15930..16325
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003646C55
Transport protein {ECO:0000313|EMBL:AJW80334.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
transport protein
Displaying 14 items

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