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SCN18_25_8_15_R2_B_scaffold_3476

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3476_1
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..165)
DNA (165bp) protein (55aa)
Putative ABC-type dipeptide transport system, periplasmic component n=6 Tax=Vibrio nigripulchritudo RepID=U4K5A5_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KFL31175.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative ABC-type dipeptide transport system, periplasmic component
SCN18_25_8_15_R2_B_scaffold_3476_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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359..1354
DNA (996bp) protein (332aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2RYE3_9RHIZ
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EUB98588.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3476_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1531..3714
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9X7_PELHB
Transport protein {ECO:0000313|EMBL:CDP53141.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3476_4
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3871..4545
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003612068
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL28270.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
AraC family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3476_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4594..5712)
DNA (1119bp) protein (373aa)
multidrug MFS transporter n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003704235
Epoxide hydrolase N terminus family protein {ECO:0000313|EMBL:AID34062.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
epocide hydrolase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_3476_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6055..7941)
DNA (1887bp) protein (629aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C595_BEUC1
Sugar ABC transporter permease {ECO:0000313|EMBL:KKB83613.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
binding-protein-dependent transport system inner membrane protein
SCN18_25_8_15_R2_B_scaffold_3476_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7953..8906)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI000379A282
Sugar ABC transporter sugar-binding protein {ECO:0000313|EMBL:KKB83454.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
sugar ABC transporter substrate-binding protein
Displaying 7 items

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